Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2598 ATGCTTCTTAGGTTGCCGAAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAACATGGTGGGTTCAAGGAGGGCTTCATGGAGGATCCTGTCAAAGATAGAGCAGAAGGAAGAGTCAATGGGCAATGAGATGAGCATCTTATCCCATCCACTAATGTGCATCTGGTATAGATCCAGAGCTCATCTCCAATCAATGCTTTTACAGAGTAATACAACTGTACTTGAGGATTTCTATGTGCATCTGGTGGATGTTGTTCCAGATCTTATAGAGCATGTTCATAGGACAACAACAAGACTCCTTCTTCATGTTAATGGGTACGTCGAACACATTGCCAATTTTAAATGGGAAGTGAAAGAGCTAGGTCTAGAGCATAATGGGTTTATTCAAGTCAAACTATTGGACTATGGACTTGAGATCCTAGCAGAAACGCTTGTCAAAGGACTTTCATGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTAATGTCATTGGATCTGCAGGTTCAGAATTTGGCAAATCAAAAGTACATTACTGGTCAGTAA 543 0.418 MLLRLPKERNLFSVGYKNMVGSRRASWRILSKIEQKEESMGNEMSILSHPLMCIWYRSRAHLQSMLLQSNTTVLEDFYVHLVDVVPDLIEHVHRTTTRLLLHVNGYVEHIANFKWEVKELGLEHNGFIQVKLLDYGLEILAETLVKGLSWVKRCSDEGRALMSLDLQVQNLANQKYITGQ* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2598 180 Pfam 14-3-3 protein 7 43 IPR023410 -
Amo09g2598 180 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 54 131 - -
Amo09g2598 180 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 129 178 - -
Amo09g2598 180 SUPERFAMILY 14-3-3 protein 7 45 IPR036815 -
Amo09g2598 180 PANTHER UNCHARACTERIZED 54 131 IPR040047 GO:0032456|GO:0042147|GO:1990745
Amo09g2598 180 PANTHER UNCHARACTERIZED 129 178 IPR040047 GO:0032456|GO:0042147|GO:1990745
Amo09g2598 180 Pfam Protein of unknown function C-terminus (DUF2451) 57 129 IPR019514 -
Amo09g2598 180 Gene3D - 5 82 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2598 Amo-Chr9 103287695 103291194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2598 7 46 14-3-3 family AT1G26480 72.500 1.37e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2598 K23288 - gmx:100788476 182.57