Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2584 ATGATATCCATCCTCACGCATTGTATTCTCTATGTATCCAAATTCAAGAAAATTGGCATGTGTTTTGGAACCCTTAATGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAGAGATAAGGTTCCTAAGAATCAAATGATCACTTGTAATAGGGAGGAAACACGTAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCCAAAACCAACTACAATTGCCCAGCAAGGATTTCTATTAGATTGAATAAGGAGGGTCTTTGGGTTATATCCAAGGTGTGTTTGGATCATTCACATCCTTGTAATTCAGAGATGGCAAAATTGTTGACATGTAATAGGGAGATGAGTATGCACATGTACCAAGCAAAACATATTAAGTGTTGGTGGGTGAAGCGGGGGATATTTATGAAGAAAGACATCGATGGATTCCAATTTTTTTACCACTCTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGCATGCATTCATATTTTGATAAATTTTTAAATAACAAGAGCTTGTTGATTGAATTTGTTAAATAA 591 0.3621 MISILTHCILYVSKFKKIGMCFGTLNDANQFYQNYAKRVGFVTKIRFTRRVGRDKVPKNQMITCNREETRKSRVSPIEKTNPKTNYNCPARISIRLNKEGLWVISKVCLDHSHPCNSEMAKLLTCNREMSMHMYQAKHIKCWWVKRGIFMKKDIDGFQFFYHSFWAGMRSTQRSESMHSYFDKFLNNKSLLIEFVK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2584 196 Pfam FAR1 DNA-binding domain 30 116 IPR004330 -
Amo09g2584 196 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2584 Amo-Chr9 103151448 103154268 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g2584 FAR1 2.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2584 - - aip:107626857 230.335