Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2575 ATGGAGTCCATGCGAGGAGAGAGGGAGTTTGTGGCTGAATTGGCTACGCTTGCAAATATCAAGCACCAAAATTTGGTGATTCTTAGAGGGTGCTGTGTAGAAGGAGCAAAAAGATATCTAGTCTATGATTACATGGAGAACAACAACCTTCACCACACTTTCTTAGGTTCGGAGGAAAGTAGGATGAGATTCAATTGGGAAGCAAGGAAGGAAGTGTCCATAGGTGTGGCCTCTGTTCTTGCGTTTCTTCATGAGGAACTTAAGCCTCATATTCTGCATAGAGATATCAAATCAAGCAACATCCTTCTTGATCGAGATTTCACACCAAAGGTCTCGGATTTTGGTCTCGCAAAGCTACTAAGAGATGACAAGTCTTATATCAGCACTCGAGTTGCTGGGACATTGGGTTATCTTGCTCCAGAGTATGCTAGTTCCGGACAAGTGTCGCGAAAATCAGATGTTTACAGCTTTGGAGTGCTACTCTTAGAAATTATTAGTGGAAGACCCGTGGTTGGTGCTTATGAAGACATGGAACGTTTCATAGTAGAGAAGGCTTGGGCAGCATATGGAGAGAATGATCTATTAAAAATGGTTGATCCAGTGCTAGATATGAACTATCCTGGGGAGGAGGCGAAACGATTCCTCATGGTGGGTTTGCTTTGCGTTCAAGAAACTGCAAAGATTAGACCGCGGATGCCAGAGGTTGTAGACATGTTGAAGAACAAAAAGGACATGGAATGTGTACAGATTTCGAAACCAGGTTTTGTTGAGGATCTAAGGAACATTAGAATCAGGCAGGAAGTAATGCACTCATCGGAAGAATCAAGTTCTGGTGGAGCAACATTTGCAAGTAGTTCATCATTGACTACTTCTACTCTTGCCCGTTAA 888 0.4302 MESMRGEREFVAELATLANIKHQNLVILRGCCVEGAKRYLVYDYMENNNLHHTFLGSEESRMRFNWEARKEVSIGVASVLAFLHEELKPHILHRDIKSSNILLDRDFTPKVSDFGLAKLLRDDKSYISTRVAGTLGYLAPEYASSGQVSRKSDVYSFGVLLLEIISGRPVVGAYEDMERFIVEKAWAAYGENDLLKMVDPVLDMNYPGEEAKRFLMVGLLCVQETAKIRPRMPEVVDMLKNKKDMECVQISKPGFVEDLRNIRIRQEVMHSSEESSSGGATFASSSSLTTSTLAR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2575 295 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 287 - -
Amo09g2575 295 Pfam Protein tyrosine and serine/threonine kinase 7 239 IPR001245 GO:0004672|GO:0006468
Amo09g2575 295 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2575 295 MobiDBLite consensus disorder prediction 271 295 - -
Amo09g2575 295 PANTHER RECEPTOR-LIKE KINASE 2 287 - -
Amo09g2575 295 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2575 295 Gene3D Transferase(Phosphotransferase) domain 1 46 253 - -
Amo09g2575 295 SUPERFAMILY Protein kinase-like (PK-like) 8 253 IPR011009 -
Amo09g2575 295 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
Amo09g2575 295 MobiDBLite consensus disorder prediction 270 295 - -
Amo09g2575 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2575 Amo-Chr9 103071364 103072636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2575 2 288 Receptor kinase-like Gene Family AT1G07650 44.595 7.61e-75 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g2575 PK_Tyr_Ser-Thr 8.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2575 - - gmx:100813945 429.483