Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2551 ATGGCATCCACCTCTTATTCTACTTCAATGATCCCACCACAAAGATTATACACCTATCACGTGTTCTTGAGTTTCAAAGGAGAGGACACTCGCACTGGATTCACTAGCCACCTCTACGCCGCCCTAAACAGGAACGGAATCACAACCTACATCGATGACAATAACCTTCGCAAAGGCGATCTTATTTCAGATGAACTCCTCAGAGCAATTGAAGAGTCTGTGTTTGCAGTCATAGTCCTCTCACCCAACTACACTTCCTACACATGGTGCTTGGATGAGCTCTGCAAGATCCTTCACTGCAACAACGACCTGCCCCAACACATCGTGACGGTGTTCTACGATGTGGATCCTTCTGATGTGAGGCACCAGAAAGGAACCTTCCAATATGCTTTCAGGAAATACCAGCACAGATTCGGAGAAGAGAGTGAGAATGTTAAAAGATGGAGACACGCTTTAACACAAGTTGCTGCTTATTCTGGTTGGCACACCAAAAATCAGAATGAGGCAGCACTTGTGGAAAGAATTTCTAAATATATACATGAAATATTGATTCCAAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTGATTCAAGAGTGAACCAAGTTGAAGGGTTACTAGAAAGTGAAGCCTTTAACTTCTTCTGTTTAAAAGCTTTTAAACTACCAAAACCTACAGAAGGGTTTTTGGATTTGTCCAAAGAAGTGGTTAAATACAGTTGTGGTCTTCCATTGGCACTTAAACTACTGGGTTCCCATCTTTATGGTAGATCCATTAAGGTTCTAAGGAAAAAGGACATTTTTCTAGAAATTGCTTGTTTCTTTAAAGGACATGAGAAAGATTATGTAACAAAGATATTAGAAGGATGTGGTCATGATGCTGAAATTGGTATTGATATTTTGATTAGTAGATCATTGATCACATTAGGGAAGAATATCTTTGGGGAGTTTGCAGTGGGGATGCATGATTTGCTTGAAGAAATGGGAACATTTATTGAAATTCAAGAGTCTCCAGATAATTGTAGCAAGCGTAGCAAGTTGTGGTGTGAAGATGATATCGATCTTGTACTCAAACAACACAAAGAAAGTAAAACAACACATAGCATCGTTCTACATGGTATGGAACTTTATAAGACTGCGGTGCGTTGGAGAGATTTATCTTTCTCAAATATATGCCAGCTAAAGCTCCTCATTTTAGATGATGTGAAAGCTCCCATTCTAAACAATATTCTAAGTTCCTTAAGAGTTTTGCAATGGAGAGGTTGTCCAATGGAAACTATGCCCCTTACGGATCAATACTATGAACTTGTTGAAATTGATTTGTGTCGGAGCAGCATTGTAATTCCATGGAATGGAAAAAAGGCTTGTGCAAAGCTGAATGATATTCACCCATCTCTCCTACACCACAAGGGCATTGTTATATTGAACTTACAGAGTTGTAACAATCTGGAAATACTTGGAGATAAAATGGAGATGAGTTCACTCAATAAACTAGATCTATTGTTGTGCGACAGTTTGAGAAAGCTCCCAGAATTTGGGAAGTGCATGAAACAGTTATCGATTCTTAATTTGGGTGGTACAGAGATAGAAGAGCTACCCACAATGCTAGGGAATTTGGTTGGCTTGTCTGAGTTGGGCATAAATGGATATAGCGAGCATAGAAGTGTTCCAAATATTGTTGGAGTTTTATGTTCTATGTCTCGTCTAACCTCTTTGAGCAGTCTGAAATTATGGGGATGTTTTCCCGCAGAGTCAGCCCTTTACTACAATCTCGGCCGCTTATCGTCGTTGACGTATTTGGATTTATCGTGGAATCGATTTGCAAGGGTTCCATTAAGTATCCATGAACTTCCCCGGCTTACACGTCTGCAGCTATATCTTTGCCATAAACTGGAGGTTTTGCCAGAGCTTCCATCAAGTCTGAGAGAACTAGACGCATCATCTTGTACATCACTAGATGCATCTTATGTCAATGATGTTATACCAAAGATGTGTCATATCTTTGTAGAATCAGCTAGACAAGATTGTGAAGACGTCTTTCAAGTGTTGATCCCAAAGGAGGAAATTCTGGCATGGTTTGACCATCAGGAACAAGGTAATGCTGTATCAGTCCCATTCCTACATAATTGTCCTTCAACTGAAACCATCGCACTTGCTCTCTGCTTCCTATTACATGGTCCAACACGTGATAGACTACGGCCTTTAGTAATCTGCAACGGTCAAGAATTCATCAACCGAAGTTTATTTCAAGTGTTTCTCACTAGAGTTTCTCCACATTTGTTTATTGTCTACTTGACTGGTTACTGTTTTAGTAGCCTATTATGCCAAGAGAATCTCTTCCAAATGTTATTTCCCAGTAATCCCGATTATAATATCCTAGTACAAAGATCTGGAGCACGTTGGGTGTGTAAGCAAGACATTCAAGATTTCAAGAGAAGAAAAATCTGA 2451 0.3978 MASTSYSTSMIPPQRLYTYHVFLSFKGEDTRTGFTSHLYAALNRNGITTYIDDNNLRKGDLISDELLRAIEESVFAVIVLSPNYTSYTWCLDELCKILHCNNDLPQHIVTVFYDVDPSDVRHQKGTFQYAFRKYQHRFGEESENVKRWRHALTQVAAYSGWHTKNQNEAALVERISKYIHEILIPKLPSSMKNLVGIDSRVNQVEGLLESEAFNFFCLKAFKLPKPTEGFLDLSKEVVKYSCGLPLALKLLGSHLYGRSIKVLRKKDIFLEIACFFKGHEKDYVTKILEGCGHDAEIGIDILISRSLITLGKNIFGEFAVGMHDLLEEMGTFIEIQESPDNCSKRSKLWCEDDIDLVLKQHKESKTTHSIVLHGMELYKTAVRWRDLSFSNICQLKLLILDDVKAPILNNILSSLRVLQWRGCPMETMPLTDQYYELVEIDLCRSSIVIPWNGKKACAKLNDIHPSLLHHKGIVILNLQSCNNLEILGDKMEMSSLNKLDLLLCDSLRKLPEFGKCMKQLSILNLGGTEIEELPTMLGNLVGLSELGINGYSEHRSVPNIVGVLCSMSRLTSLSSLKLWGCFPAESALYYNLGRLSSLTYLDLSWNRFARVPLSIHELPRLTRLQLYLCHKLEVLPELPSSLRELDASSCTSLDASYVNDVIPKMCHIFVESARQDCEDVFQVLIPKEEILAWFDHQEQGNAVSVPFLHNCPSTETIALALCFLLHGPTRDRLRPLVICNGQEFINRSLFQVFLTRVSPHLFIVYLTGYCFSSLLCQENLFQMLFPSNPDYNILVQRSGARWVCKQDIQDFKRRKI* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2551 816 Gene3D Ribonuclease Inhibitor 354 669 IPR032675 -
Amo09g2551 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 209 IPR044974 GO:0006952
Amo09g2551 816 PRINTS Disease resistance protein signature 491 507 - -
Amo09g2551 816 PRINTS Disease resistance protein signature 241 255 - -
Amo09g2551 816 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Amo09g2551 816 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 265 446 - -
Amo09g2551 816 Gene3D - 207 273 IPR042197 -
Amo09g2551 816 Pfam TIR domain 19 190 IPR000157 GO:0007165
Amo09g2551 816 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 161 IPR035897 -
Amo09g2551 816 SUPERFAMILY L domain-like 386 725 - -
Amo09g2551 816 Gene3D - 16 186 IPR035897 -
Amo09g2551 816 SUPERFAMILY "Winged helix" DNA-binding domain 265 358 IPR036390 -
Amo09g2551 816 SMART till_3 18 158 IPR000157 GO:0007165
Amo09g2551 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 262 IPR027417 -
Amo09g2551 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 456 682 IPR044974 GO:0006952
Amo09g2551 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 265 446 IPR044974 GO:0006952
Amo09g2551 816 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 209 - -
Amo09g2551 816 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 456 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2551 Amo-Chr9 102539396 102543674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2551 200 645 WRKY Transcription Factor Family AT5G45050 29.297 4.66e-39 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2551 - - adu:107485873 661.373