Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2547 ATGAACCTAGTCGACCAAGAACTCAGCGAGCCTTACTCTATATTCACGTATCGTTACTTTGTCTATCTCTGGCCTCAGCTCTCTTTCCTAGCATTCCACAAGGGTAAATGTGTCGGCACGGTGGTTTGTAAGATGGGCGACCATCGAAACGTTTCCAGAGGATACATTGCCATGTTGGTTGTGATAAAGCCCTATAGAGGAAAAGGCATTGCTACAGAACTTGTTACTAGATCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACTCTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTCTTTCATTATTATTTGAACGGAGTCGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGGCAGATAAATATGGTACTAGTCATATAACAAGTGATCATGGTAATTCAGCATTTGAACAATGA 498 0.4398 MNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNVSRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMADKYGTSHITSDHGNSAFEQ* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2547 165 Gene3D - 1 146 - -
Amo09g2547 165 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 1 133 IPR044542 GO:0004596|GO:0017196
Amo09g2547 165 CDD NAT_SF 28 93 - -
Amo09g2547 165 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 135 IPR016181 -
Amo09g2547 165 Pfam Acetyltransferase (GNAT) family 23 110 IPR000182 GO:0016407
Amo09g2547 165 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 134 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2547 Amo-Chr9 102509682 102510179 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo09g2547 Acetyltransf_1 1.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2547 K00670 - gmx:100806790 304.293