Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2542 ATGACAGGTAAGAGCCATGTGAAGGCAAAGAAGAACATTGGAAGAAAAGAGTATCAACTTGTGACCTTTGATCTTCCATACTTAGCATTTTACTACAACCAGAAGCTGCTGTTTTATAAAGGGAATGACTTTGAAGGAATGGTGGAGAAGGTGAAAGAGGGTCTAAGTGTGGTTCTTGAGGAGTTTCATCAGCTAGCAGGGAAGATAGGAAAAGATGAAGAAGGAGTKTTCAGAGTGGAATATGATGATGAAATGGAAGGTGTTGAAGTAACTGAGGCTGTTGCTGAGGATGTTGGTGTTGAAGATCTTGCTGTTTCTGAGAGTAGCAGTTCCTTGATGGAACTTGTTCCTTACAATGGTATCTTGAATTTAGAAGGCATGCATAGGCCTTTGCTTGCAATTCAGCTGACCAAACTGAAAGATGGGCTTGCAATGGGCTGTGCCTTCAACCATGCAGTCCTTGATGGGACTTCCACGTGGCAATTCATGAGTTCATGGGCCGAGATCTGCAGCGGCGCACCGTCAACAGTAGCCCCACCCTTCCTTGACCGGACCAAGGCCCGAAACACCCGGGTGAAGCTTGACCTCTCATTGCCTGAGCCCAACGGGCCGACATCCGATAACGAGGAAAAGCCCAAGCCCAAGCCCAAATTAAGAGAAAAGATCTTCAAATTTTCCGAGTCTGCCATCGACAAGATCAAGTCAACGGTCAACAAAAACCCACCATCGGACGGCTCAAAGGCATTCTCAACATTCCAAGCTCTCTCGGCCCATGTTTGGCGCCACATAACCCTGGCCCGTAACCTAAAGCCCGAAGACTACACAGTCTTTACCGTATTCGTAGATTGTAGAAAACGGATCGACCCACCAATGCCAGAGGCCTATTTTGGAAACCTTATCCAAGCCATATTCACCGTGACAGCAGGTGGGCTTCTGTTGGCCCATCCACCACAATTCGGTGCATCATTGATCCAAAAAGCAATTGAAGCCCACAATGGTAAGGCAATTGATGAGAGAAACAAAGAGTGGGAGAGTGCACCAAAGATATTTGAATTCAAGGATGCTGGAGTGAATTGTGTGGCTGTGGGAAGCTCTCCTAGGTTTAAAGTTTATGACATTGATTTTGGTTGGGGGAAGCCTGAAAATGTGAGGAGTGGAACCAATAACAAGTTTGATGGTATGATTTATTTGTATCCCGGCAAGAGTGGTGGTAGGAGCATTGATGTTGAGTTGACTTTGGACCCTCATGCTATGGAGATTTTGGAGAAAGACAAAGACTTCCTTCTTGAGGTTTAA 1296 0.4591 MTGKSHVKAKKNIGRKEYQLVTFDLPYLAFYYNQKLLFYKGNDFEGMVEKVKEGLSVVLEEFHQLAGKIGKDEEGVFRVEYDDEMEGVEVTEAVAEDVGVEDLAVSESSSSLMELVPYNGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMSSWAEICSGAPSTVAPPFLDRTKARNTRVKLDLSLPEPNGPTSDNEEKPKPKPKLREKIFKFSESAIDKIKSTVNKNPPSDGSKAFSTFQALSAHVWRHITLARNLKPEDYTVFTVFVDCRKRIDPPMPEAYFGNLIQAIFTVTAGGLLLAHPPQFGASLIQKAIEAHNGKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLDPHAMEILEKDKDFLLEV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2542 431 Gene3D - 201 424 IPR023213 -
Amo09g2542 431 Gene3D - 1 196 IPR023213 -
Amo09g2542 431 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 427 - -
Amo09g2542 431 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 7 427 - -
Amo09g2542 431 MobiDBLite consensus disorder prediction 193 218 - -
Amo09g2542 431 Pfam Transferase family 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2542 Amo-Chr9 102453607 102456442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2542 31 431 Monolignol Biosynthesis Gene Families AT5G48930 26.887 2.66e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2542 K19747 - gmx:100790669 738.799