Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2536 ATGGAAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACAATGAGGGTGGTATGGACCCTGAAGTTGAAGGGTCTATTATATGAAAACATTGAAGAAGATCGCTACAATAAGAGTCCTCAACTTCTAGAATACAACCCTGTGCATAAGAAGATTCCAGTGCTTGTTCATGGCGGAAAACCCATTTGTGAGTCCATGATCATTGTTCAATACATTGATGAGTTATGGCCACAGAATCCATTGGTCCCTCATGATCCCTTTGAGAGAGCTCAATCAAGGTTTTGGGTTGCATATTCTGAACAATTGTTTCCTGCAGTTGTGCCACTAATTTACGTCGACATTGCTGGTGATGAAGAGAAGGAGAAGGCCATAGAGAATGTCCAAAAACTTCTAAGAGATGTTGAAGATCAATGCGTGTTATTGGTTGATGAAAAAAAATTCTTTGGTGGTGACAATATCAATATGGTGGACATAGCTTTTGGGTCAATGATCAAATTTCTTGTAACTATGGAAGATCTGAATGAATTGAAGGTGCTAGAAGTTGAGAAGTTCCCTCGCTTGCATTCATGGTTTAATAATTTCAAAAATGTCTCAATCATCAAAGAAAACCTTCCCAACAGAGAGAAAATGTGTGCTATTTTGAAGTATATCAGAGAAAGAAAAAGAGAATTGTAA 678 0.3746 MEDLKLHGFWYSPFTMRVVWTLKLKGLLYENIEEDRYNKSPQLLEYNPVHKKIPVLVHGGKPICESMIIVQYIDELWPQNPLVPHDPFERAQSRFWVAYSEQLFPAVVPLIYVDIAGDEEKEKAIENVQKLLRDVEDQCVLLVDEKKFFGGDNINMVDIAFGSMIKFLVTMEDLNELKVLEVEKFPRLHSWFNNFKNVSIIKENLPNREKMCAILKYIRERKREL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2536 225 CDD GST_C_Tau 87 218 IPR045074 GO:0004364|GO:0006749
Amo09g2536 225 CDD GST_N_Tau 4 77 - -
Amo09g2536 225 Gene3D Glutaredoxin 1 82 - -
Amo09g2536 225 Pfam Glutathione S-transferase, C-terminal domain 111 195 IPR004046 -
Amo09g2536 225 SUPERFAMILY GST C-terminal domain-like 75 221 IPR036282 -
Amo09g2536 225 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 220 - -
Amo09g2536 225 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Amo09g2536 225 Coils Coil 118 145 - -
Amo09g2536 225 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Amo09g2536 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Amo09g2536 225 Gene3D - 83 224 - -
Amo09g2536 225 SFLD Main (cytGST) 1 221 - -
Amo09g2536 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Amo09g2536 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Amo09g2536 225 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2536 Amo-Chr9 102352035 102353653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2536 2 221 Glutathione S-transferase Gene Family AT2G29460 42.152 1.47e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2536 K00799 - gmx:547584 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2778 19 130171469 130173039 Amo09g2536 09 102352035 102353653 hybridization