Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2534 ATGGCAGAATTGAAGCTACATGGATTTTGGTATAGCCCCTTAACGTTAAGGGTGATATTGACCCTAAAGTTGAAGGGTATAACATATGAGTATATAGAAGAAGATCGCTTCAATAAGAGCCCTCAACTTCTTGAATACAACCCTGTGCATAAGTTGACTCCGGTGCTTGTTCATCATGGAAAATCCATTTGTGAGTCTATGATTATTGTTGAATACATTGATGAGGTTTGGCCACAGAATCCTTTGGTTCCTCATGATTCCTATGATAGAGCTCAAGCAAGATTTTGGGTTGCATATGCTGATCAAATGATTCCTGCCGTTAAGCCACTATTCCACATCATCAGTGATGATGAAGTGCGAGAAAAAGCCATAGAGAGGGTCCAAGAACATCTCAAAGTTATTGATAATCAATGCCTAATTGATCAGAAGTTCTTTAATGGTGACCATATTAACTTTGTGGACATAGCTTTGGGGTCAGTTATCCAATTTCTTGTAACCATAGAAGATTTGAATCAACTGAAGGTCATGGAAGCTCATAAATTCCCTCACCTATATTCACGGTTTAGTAATTTCAAGGATTCCCCAATTGTTAAAGAAAACATCCCAAATAGTGAGAAATTAATAGCTTGTATCAAGCTTGTGAGAGAAAAAATGTATGCACATTCTTAA 669 0.3722 MAELKLHGFWYSPLTLRVILTLKLKGITYEYIEEDRFNKSPQLLEYNPVHKLTPVLVHHGKSICESMIIVEYIDEVWPQNPLVPHDSYDRAQARFWVAYADQMIPAVKPLFHIISDDEVREKAIERVQEHLKVIDNQCLIDQKFFNGDHINFVDIALGSVIQFLVTIEDLNQLKVMEAHKFPHLYSRFSNFKDSPIVKENIPNSEKLIACIKLVREKMYAHS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2534 222 CDD GST_N_Tau 4 77 - -
Amo09g2534 222 Pfam Glutathione S-transferase, C-terminal domain 108 191 IPR004046 -
Amo09g2534 222 SFLD Glutathione Transferase (cytosolic) 1 220 IPR040079 -
Amo09g2534 222 CDD GST_C_Tau 88 209 IPR045074 GO:0004364|GO:0006749
Amo09g2534 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Amo09g2534 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Amo09g2534 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 220 IPR010987 -
Amo09g2534 222 Gene3D - 86 222 - -
Amo09g2534 222 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Amo09g2534 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Amo09g2534 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Amo09g2534 222 Gene3D Glutaredoxin 1 85 - -
Amo09g2534 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Amo09g2534 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2534 Amo-Chr9 102314717 102316252 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2534 4 212 Glutathione S-transferase Gene Family AT3G09270 43.192 2.80e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2534 K00799 - gmx:547584 278.1