Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2390 ATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTATGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGAAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTTTAACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAAGAGTATAGAAGCAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTATCTCGTTGGAGGTATATGAAAGATCTGTATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTTGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACTGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGACTAAAGATTGA 645 0.4295 MRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVKSHNHDLTPPQFAHLVPANRRLTVTDRVQVENLHNFGVKSCHIMGFYVNRKNTLIDFMHNLDRALKEYRSNELIADFKSQCSEPVMIISLEVYERSVSCYFTRNIFKEICNEIQRAGALNITVLSTTLDKVEFSVTALGDPTKD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2390 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 11 92 - -
Amo09g2390 214 Pfam FAR1 DNA-binding domain 8 78 IPR004330 -
Amo09g2390 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 92 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2390 Amo-Chr9 98764784 98766212 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g2390 FAR1 1.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2390 - - adu:107466385 246.128