Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2380 CGCCGACCTCCTCTATTGGACCATCCAAGCGCCGCTCCATTCTCAAGTGAAGTATACGCTCCCGATTATTCATCCTATCACGGCGGCTACAGTGCATGGTGCCTCATTGGTTACATCAGCAACGCCAACCTCATCCAGTCAAATAATCAAGAGAAGGGTGCGGTGCAATACTTTTGGAAGAGAGCATCTTCCATGGCGTTTTCAACCCCGGAAAGCGGATCGATTAGTAAATTTATCAATCCAACACAAGACGATGAACAATTCAGCGTGGGTGAATTAATTATTCAAGAGCAAGAAGGGTTGAAGGTCGACGAAATTACCGATGTTGTTGTAACTAGAAAGGATGAGTTAGACACGGACACAAGTTTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAAAAAGTTGAATTCGTTACTAAAATCAGGAACACGAATTTCGATAAGACGCGGAATGAATCAAAGATACCGGTTAATCAATCTATTTACTGCACGCGAGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTACAACCACGAGATGCAGAGTAAGGATGTATGTCATGCTGAACAAGAAGAAGGAAAGTTGGGTTGTGTCTAGATTAGAACTGAGGCATTCTCACCCCTGTTCGGCTAAGAAAGTTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAAGTGCGTCATTACGGATAACGACGAGGCTGGAATAAGACCCAACAAGACGTATCTAGCACTGCAAACGAGGTTGGTGGTCCTCAAACCTGGATTTTTCAGAAAAGGATGTAAGAAATTACATCACACGCAATCTCCGATGCTCCGATGA 864 0.4444 RRPPLLDHPSAAPFSSEVYAPDYSSYHGGYSAWCLIGYISNANLIQSNNQEKGAVQYFWKRASSMAFSTPESGSISKFINPTQDDEQFSVGELIIQEQEGLKVDEITDVVVTRKDELDTDTSFGSLPLAQKFYANYAKKVEFVTKIRNTNFDKTRNESKIPVNQSIYCTREGYRESRVNAATRANRITTTRCRVRMYVMLNKKKESWVVSRLELRHSHPCSAKKVVHYHEYRELTMHAKCVITDNDEAGIRPNKTYLALQTRLVVLKPGFFRKGCKKLHHTQSPMLR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2380 287 Pfam FAR1 DNA-binding domain 131 220 IPR004330 -
Amo09g2380 287 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 101 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2380 Amo-Chr9 98206480 98208459 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g2380 FAR1 4.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2380 - - ahf:112730161 305.449