Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2360 ATGGAGATAGCAGGTGGTGCTGATGTGGCGGAGAGCGTGGCGCAGTTCGCCAGGAGGCGACAACGCGGAGTTTGTGTGCTCAGTGGGAGTGGATCGGTTGCCAATGTTACCATCCGACAACCTACGGCGCCTGGCGCCGTAGTCCTTCATGGAAGGTTCGAGATCTTATCTTTAACAGGAGCATTTTTACCTGGCCCTGCCCCTCCTGGGTCCACGGGTTTAACCGTGTATCTGGCCGGTGGACAAGGTCAGGTTATTGGAGGGAGTGTTGTTGGGTCACTCGTAGCTGTTGGGCCTGTTATGGTCATTGCGGCCACATTTGCTAATGCTACCTATGAGAGGCTCCCACTTGATGAGGAAGATGAAGGGCCTAGCGGTGGTGGTGGTGGTGGTAGCAGTGGTGGTACTGGAGGAGGTGCAGGTGGTGGTGGATCTCCACCACCACAGCCTCTTCCAGGGATCGGAGGTAGTGGAGGCCATCATTCGCTACACGCCGGTGGTGGCCTTCCCGATCCAACATCACTCCCTTTGTATAACATGCCACCTAATTTGATGCCTAATGGAGGGCAGGTAGGGCATGAGGCTTATCCTTGGCCTCATGGACGACCACCTTATTGA 618 0.5583 MEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTIRQPTAPGAVVLHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVIGGSVVGSLVAVGPVMVIAATFANATYERLPLDEEDEGPSGGGGGGSSGGTGGGAGGGGSPPPQPLPGIGGSGGHHSLHAGGGLPDPTSLPLYNMPPNLMPNGGQVGHEAYPWPHGRPPY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2360 205 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 108 IPR005175 -
Amo09g2360 205 ProSiteProfiles PPC domain profile profile. 1 129 IPR005175 -
Amo09g2360 205 MobiDBLite consensus disorder prediction 117 205 - -
Amo09g2360 205 PANTHER DUF296 DOMAIN PROTEIN 1 205 - -
Amo09g2360 205 CDD DUF296 2 107 IPR005175 -
Amo09g2360 205 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 120 - -
Amo09g2360 205 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 205 IPR014476 GO:0003680
Amo09g2360 205 Gene3D - 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2360 Amo-Chr9 97344890 97346604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2360 1 205 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.201 1.64e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2360 - - aip:107615885 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2631 19 125123074 125124797 Amo09g2360 09 97344890 97346604 hybridization