Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2343 ATGTCTCTTGATTGTGTGCAAAGAATTCAAGCCACACATTCTGATGTTCTTGGCCCAGCTTCCTTCAATCATGGGATGAGTCCTTTTCTATATGTTACTTATCGCTATTTTGTGGCTGCTCTTGTCATGTTCCCCTTTGCATATTTTCTCGAGAGAAAACAACGACCAAAGCTCACGTTTGCTCTGTTCATGGAAATTTTTGTGCTTTCTTTGATTGGGATCAGTGCGCCAATCAACATGTATTTTGCAAGCTTGCAATACACTTCTCCAACTCTAGTTGCTTCCATGTTCAACATCGTAGCTTCCCTTACCTTCATTATTGCTGTAGCACTCAGGTACGAAGCTCTTGATATTGGAGACCCTCGTGGAATAGCAAAAGTTATTGGGACATTGATATCCTTAGGAGGTGTAATGACGATGACACTGTACAAAGGACCACCGATGAGGAATTTGTGGGGTCCACTAATCCATATTCAAGGAAAAAATGGTGGCACCGAAGAGAACTGGTTAAAGGGTTCACTTCTTGCAGTTACAAGTTGTGTTTTATTATCTGTATGGTATATTATGCAGGCATCCACTTTGAAAAGGTACCCAGCTCAACTGTCGCTAACTTCGTGGATGTGCTTTGTTGGAGCAGTGCAATCAGCTGTTTTCACAGCAATTGTACAACATCATCCTTCAGCATGGTTCATAGGCTTCAACATCGATTTGTGGTCCACGTTATATGGAGGAATTGTGGTGTCTGGATTGGTCATATATGTTCAGCTATGGTGCACTGAGAAAAAAGGGCCAGTCTTTGTCACAATGACTACCCCACTTTGTACCGTGCTTGTGGCAATTCTAGCATATTTCGTCTTTGGCGAGAAACTTTATTTGGGCAGCATGATTGGCGCATGTTTTGTCATCGTTGGTCTCTATTTGCTGTTGTGGGGTAAAGAAGGTGACCAACAAGTTCACACTATTTCCAAAGATACATCAAACTGCAATGGTGAAGACCCAGTAGAATTATGCAAAATCTGA 1020 0.4196 MSLDCVQRIQATHSDVLGPASFNHGMSPFLYVTYRYFVAALVMFPFAYFLERKQRPKLTFALFMEIFVLSLIGISAPINMYFASLQYTSPTLVASMFNIVASLTFIIAVALRYEALDIGDPRGIAKVIGTLISLGGVMTMTLYKGPPMRNLWGPLIHIQGKNGGTEENWLKGSLLAVTSCVLLSVWYIMQASTLKRYPAQLSLTSWMCFVGAVQSAVFTAIVQHHPSAWFIGFNIDLWSTLYGGIVVSGLVIYVQLWCTEKKGPVFVTMTTPLCTVLVAILAYFVFGEKLYLGSMIGACFVIVGLYLLLWGKEGDQQVHTISKDTSNCNGEDPVELCKI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2343 339 PANTHER WAT1-RELATED PROTEIN 8 325 IPR030184 GO:0016021|GO:0022857
Amo09g2343 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 206 312 - -
Amo09g2343 339 PANTHER WAT1-RELATED PROTEIN 8 325 - -
Amo09g2343 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 144 - -
Amo09g2343 339 Pfam EamA-like transporter family 171 309 IPR000620 GO:0016020|GO:0016021
Amo09g2343 339 Pfam EamA-like transporter family 25 140 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2343 Amo-Chr9 96868425 96873036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2343 15 335 Nodulin-like Gene Family AT5G07050 39.640 1.73e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2343 - - gmx:100527877 496.123