Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2342 ATGGAACAAAAGAAATCTTCTATTGTTCTTGTTTTGAGAGAGTTCAAGCCGCACTTTCTGATGGTGTTAGCTCAAGTTGGCTATGCATTCTTGTATTTCATCACTGAAGCTTCCTTCAACCATGGGATGAGTCCTTTCTTGTATGTAACCTACCGCCATATCGTCGCGGCGGTTGTCATGTTCCCATTTGCATTCTTTCTAGAGAGAAATGAGAGACCAAAGCTCACATTTGCTATATTCATGGAAATTTTTGTGCTTTCCTTGGRTGGGATTAGTGTACCAATCAATATGTACTTTGCAAGCCTGCAGTACACTTCTCCAACCTTTGTTGCTTCCATTGTTAACGTCATAGCTTCCCTTACCTTCATCATTGCCGTAGTACTAAGGTATGAGACTCTTGATATTCGAGATCCCCGGGGAATAGCTAAAGTTATAGGGACAATGTTGTCCTTAAGCGGTGTAATGACAATGACACTGTACAAAGGACCTACCATGAGAAATTTGTGGCGTCCGGTAATTCATATTCCAGGAAAGAGTGCTGCTGCAGCACATGAGAACTGGCTCAAGGGTTCTCTTCTTGCAGTTATAAGCTGTGTTTCATGGTCTGTCTGGTATATCATGCAGGCAGCCACTTTGAAAAGATATCCAGCACAGTTGTCCCTTACTACATGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTCTTAATTATAGGGCATAAACCTTCAGCTTGGACTATAGGGTTCAACATTGACCTGTGGTCCACATTATATGGTGGAATTGTGATTGCTGGTTTGATAATATACATTCAGCTGTGGTGCACTGAGAAAAAGGGGCCAGTCTTCGTTACAATGACTACGCCCCTTTGTACCATACTTGCTGCAATTTTAGCATACTTTGTCTTTGGTGAGAAACTTTACCTCGGCAGCATCATAGGCGCAACTTTTGTCATCATTGGTCTATACTTGCTGTTGTGGGGTAAAGAAGGTGACCAAAAGATTCATATCAACACTAAACCGTGCAGTGGTGAAGATCCAGAATGCAGACTACAATCAGTACCTTAG 1074 0.4227 MEQKKSSIVLVLREFKPHFLMVLAQVGYAFLYFITEASFNHGMSPFLYVTYRHIVAAVVMFPFAFFLERNERPKLTFAIFMEIFVLSLXGISVPINMYFASLQYTSPTFVASIVNVIASLTFIIAVVLRYETLDIRDPRGIAKVIGTMLSLSGVMTMTLYKGPTMRNLWRPVIHIPGKSAAAAHENWLKGSLLAVISCVSWSVWYIMQAATLKRYPAQLSLTTWMCFVGAAQSAVFTVLIIGHKPSAWTIGFNIDLWSTLYGGIVIAGLIIYIQLWCTEKKGPVFVTMTTPLCTILAAILAYFVFGEKLYLGSIIGATFVIIGLYLLLWGKEGDQKIHINTKPCSGEDPECRLQSVP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2342 357 PANTHER WAT1-RELATED PROTEIN 15 345 - -
Amo09g2342 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 331 - -
Amo09g2342 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Amo09g2342 357 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Amo09g2342 357 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020|GO:0016021
Amo09g2342 357 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2342 Amo-Chr9 96839253 96844884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2342 3 352 Nodulin-like Gene Family AT5G07050 39.726 7.17e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2342 - - gmx:100527877 563.148