Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2319 ATGGAACGTGGGGTTGTGGATGGCATTATCAACAGGCTTCTAGAAGTAAGAGGCAAACCGGGGAAGCAAGTGCAGCTCTCTGAGGCTGAGATCAGGCAGCTATGCCTTGTCTCCAAGGACATCTTCTTGAGACAACCTAACCTTTTGGAACTTGATGCACCAATCAAGATCTGTGGGGATATCCATGGTCAATATTATGATCTTCTGAGAATCTTTGAAAATGGTGGATTCCCACCTCGTTCCAATTACTTGTTCTTAGGAGACTACGTTGATCGCGGAAACCAAAGTCTTGAGACAATATCTCTTCTTCTAGCATACAAAATCAAATACCCTCAGAACATTTTCCTCCTCAGGGGAAACCATGAATGCGCTTCCATAAACCGTATCTACGGTTTCTACGACGAATGCAAGAGAAGATACAGTGTGAAGCTGTGGAAAACATTCACGGATTGCTTCAACTGCTTGCCCGTGGCGGCTCTTATCGACGACAAGATACTCTGCATGCATGGTGGACTCTCCCCTGAATTGCACAACTTGAACCGGATAAGGACTTTGCGCCGTCCGGTCCAAGTGCCCGACAGTGGTCTGCTATGTGATCTTCTCTGGTCTGATCCCTGCGGAGACATTCAAGGCTGGGGAGGAAGCGAACGCGGAGTTTCGTGTACTTTCGGCCCTGATAGGGTCACTGAGTTTCTGAGGAAGCATGATCTTGATTTGATCTGTAGAGCACATCAGGTGGTGGAAGATGGATATGAATTCTTTGCTAATAGGCAACTTGTAACAATCTTCTCTGCACCAAATTACTGTGGGGAATTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACACTTGTGTGTTCTTTCCAAATATTGAAGCCTCTAGAGAATCAAAAGCTGCAGCAGCTTTATAAGTTTGGTTATGGAAGCACAACTACAGTTAAGCCTAGTCCTCCCACAAAATTCAAGCAAGCATTTCTTGGTGCAAACGCATGA 996 0.4558 MERGVVDGIINRLLEVRGKPGKQVQLSEAEIRQLCLVSKDIFLRQPNLLELDAPIKICGDIHGQYYDLLRIFENGGFPPRSNYLFLGDYVDRGNQSLETISLLLAYKIKYPQNIFLLRGNHECASINRIYGFYDECKRRYSVKLWKTFTDCFNCLPVAALIDDKILCMHGGLSPELHNLNRIRTLRRPVQVPDSGLLCDLLWSDPCGDIQGWGGSERGVSCTFGPDRVTEFLRKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLVCSFQILKPLENQKLQQLYKFGYGSTTTVKPSPPTKFKQAFLGANA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2319 331 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 324 - -
Amo09g2319 331 Gene3D - 2 305 IPR029052 -
Amo09g2319 331 SUPERFAMILY Metallo-dependent phosphatases 19 299 IPR029052 -
Amo09g2319 331 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Amo09g2319 331 SMART pp2a_7 26 296 IPR006186 GO:0016787
Amo09g2319 331 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 324 - -
Amo09g2319 331 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Amo09g2319 331 Pfam Serine-threonine protein phosphatase N-terminal domain 6 51 IPR031675 -
Amo09g2319 331 CDD MPP_PP1_PPKL 5 294 - -
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Amo09g2319 331 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2319 Amo-Chr9 96196029 96198387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2319 33 239 Calmodulin-binding Proteins AT5G63870 32.389 5.06e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2319 K06269 - gmx:100791655 574.704