Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2243 CAGAAAAGGTTCATTATGATTGCTTTATTGTGTATTGTTTCTACCATGGTGCATGGCCAAGGTACCCGTGTAGGGTTCTATGCTACTACATGTCCAAAAGCCGAGTCCATTGTCAAGTCCACGGTTAAATACCATCTTAACTCCGACCCTACTCTAGCTGCTGCCTTACTCAGAATGCACTTCCATGATTGCTTTGTCCAAGGTTGTGACACTTCTGTCCTCGTTACCGGCTTTGCCACCGAGAGAACAGCATTTGCAAACCTCGGACTTAGAGGATTCAAGGTCATTGACAACACAAAGACACAACTCGAGGCTGCATGTCCCAGCGTTGTGTCTTGCGCCGATATTGTTGCCCTTGCTACTCGCGACTCCGTCATCCTGAGCTGTGGATTGAGTTGGCAAGTGCCTACAGGACGTAAAGATGGTCATGTGTCACAAGCTTCGGATGTTAACAACTTGCCTGCACCTACGAACTTTATTGATGTTCAAAAACAGAAGTTTGCAGCAAAGGGCCTCAACACACAAGACCTCGTTATCCTTGTTGGAGGAGATACGATAGGTACCGCAGCATGCCAATTCTTGAGCAACAGATTGTCTTTTCATGGTTGTAATGGGGCTAAGGTAAGGGTGATGGTTTACATAAGGCTAAGTGAGCTTATACATTGA 666 0.461 QKRFIMIALLCIVSTMVHGQGTRVGFYATTCPKAESIVKSTVKYHLNSDPTLAAALLRMHFHDCFVQGCDTSVLVTGFATERTAFANLGLRGFKVIDNTKTQLEAACPSVVSCADIVALATRDSVILSCGLSWQVPTGRKDGHVSQASDVNNLPAPTNFIDVQKQKFAAKGLNTQDLVILVGGDTIGTAACQFLSNRLSFHGCNGAKVRVMVYIRLSELIH* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2243 221 PANTHER PEROXIDASE 4 207 - -
Amo09g2243 221 Gene3D - 27 153 - -
Amo09g2243 221 PANTHER PEROXIDASE 25-RELATED 4 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 Gene3D Peroxidase, domain 2 154 199 - -
Amo09g2243 221 ProSiteProfiles Plant heme peroxidase family profile. 21 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 SUPERFAMILY Heme-dependent peroxidases 23 199 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 Pfam Peroxidase 38 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2243 221 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Amo09g2243 221 CDD secretory_peroxidase 23 198 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2243 Amo-Chr9 92902638 92911211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2243 5 198 Peroxidase AT5G64120 61.576 3.03e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2243 K00430 - gmx:100783523 303.908