Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2231 ATGTCTCTCGTTGTTGATGATGACAAGGAAAACTCGTTTCTGGTTCACGTGGAGCCCTTTCTTCCACTCGATGTGTTCGTCAGCTTCAGAGGGGAAGACACCCGCACCAACTTCACCAGCCACCTCTATTCCCCGCTCTCAAGAAACGGCATCAAGGCATACATGGACGACGAAGGCCTCGAGAAGGGTCGCGATGTCTGGCCATCGCTGTCCCAAGCAATCGAGGACTCCCATGTTGCCATAGTAGTGTTCTCCAAGAACTACGCGTCTTCCAGATGGTGCTTGGAAGAGCTTGTGAAAGTAGTGATACCTGTGTTTTACGAGGTCGATCCGGCGGAGATTCGAAATCAGAGAGGAGTGTACGGGGAAGCCATTGCAGAACATGAAAGAGGATTGTTGGGTGATAAAAGTGTGGAAGAAGTGAAGAAGATAGTGTCCGCTTGGAAGGATGCTCTCATGGAAGCGGCAAACATATCGGGGCGGGACACTCGTAGTCGCGAGTACAAGAACGAGTCACAAGTCATCGATCATATTGTTGAAGATGTATTGAAAAAGTTGGAATTAAGGTTTCCTAATGAGCTACAAGTTAACCTTGTTGGAATTGACAAAAGTTGCAAAGATGTGTCATTATTGCTATCAAAAAGTAAAAGCAAAAATGTGCATGTAATTGGAATTTGGGGCCTGGGCGGAATAGGCAAAACAACCGTTGCAAAGGCTGTGAGGAGGCTTAGTAATAAAAAAGCTTTAGTTGTACTTGATGATGTGGATGATTCAGAGCAACTAGAACAATTGTGTAGAGAATGTAGCTATGCTGGTCCAGAAAGTAAAGTGATTATAACAACAAGAAATAAGCATTTGCTTAGGGGAATAGTTGATGAGGATGATATATATGAGGTCAAGACATTGAGCTTTGGGAGATCTGTAGAGCTTTTTTGCTTGAGTGCCTTCAAAGATTGGGTTCCCAAAAAAGGATATGAAGATCTCTCTCAGAGAGCAGTTGATTATGCAGGGGGTGTTCCTTTAGCTTTAAAAGTATTGGGCTCAAATCTCCGTGACACAAGTATTGAATTTTGGGATAGCGAATTGAATAAACTCAAGGACTATCCCTACGATGGAATTCAAAAGGTGTTACGTGTGAGCTATGATGGACTAGATATTCTAGAGCAGAAGATATTTTTGGATATTGCGTTCTTTTTCAAAGACGAGAACAAATATTTTGTGGAAAAGATACTAAATGCTAGTGGTTTATTTGCTGTTAGTGGAATAAAAGTCCTTACAAATAAAGCTCTCATAACTATTTCAAAGGACAAGAAGATACAGATGCATGATTTAATACGAGATATGGGCTTGAATATTGTTCGTCAAGGCATTAAAGATCCTGGAAAACGTAGTCGATTGAAGGATATTGAAGAAGTTTCAGATGTGCTTGAATATAAAAGGAAGGGAAGTGATGCAATTGAAGGTATAAAATTAGATTTGTCTCAAATTGATGATCTACACTTGAACTCTAAAGCATTCAGCATGATGAGTGATCTAAGATATCTAAAATTGTATGCTCCCTCTGGCAAGACTTTGGGTAACATGGTGTATCCGGAAGTCCTTAATGAATTTTCAGGTAAGCTGAGCTACCTTGAATGGCATGGATATGGTTTGAAGTCTCCACCGGAAAATTTGTTTACTCAGAGGCTTGTTGAGATTTGTATGCCGCACAGCCATATTACCAAACTTTGGCATGGGGTGAAGAATCTTGTGAGTTTAGAGAGAATTGATCTAAGTGAATGCAAAGAGTTGGCGAATCTCCCGGATTTGTCCAAGGCATCAAAACTTAAATCGCTTAACCTTTCTGGTTGTGAGAGCTTGGCAGAGCTTCATTCATCTATTTGGTCTCTTGACGCTCTTGAAATTCTAGCACTGGATGGATGCAGAAAACTCACAAGTTTGAGAAGTGAGAAGCACTTGAAATCTCTCAAGACGATCAGTGTTAACGGCTGCACAAGTCTCAGAGAATTTTCCGTGTCCTCTCGTGTGATGGAATGTCTAGATCTGAGAAATGCTGGAATAGAAGAATTGCACCAATCAATTCAGCGCTCAAGCAAGCTTAAGTCACTCTACCTAGACAAGCTGAGAATTTCTAATTGCAGACAACTAGTACTCAACAAAGAGCAACTGCATACCTTATTCAACGGCTTAAGGTGTCTGCACTTACTGTATTTGAAGGATTGTGATAAATTGTCTGAACTCCCTAACAACATTGGGTGCTTGGAATATCTCTGTGACCTAAGATTAGATGGAAGTGCTGTAGAGACATTGCCTATAACCGTCAAGGATCTAATCAATCTGGAAATTTTGTCGCTGAGAAACTGTAAGAACCTTAAGTACCTACCTACTCTTCCGACACTTATCAAAGAGCTTTATACCTTTGCGAAAGAGATGAGAGGAAGCACCAAGTTCATCTCGTTCGAGAATTGCACAAACCTGGATGGACCTTCACGTGAAGGAATCACGAAAGGTGCGAATTTAATAGCAACAAACGCGATACTTAAAAATAAGGATGTGGAGGAGGAGGTTCGTTCGCAGCAATATAACAGTGCACCAGAGCTAGGCCATAGCTACAGCTTCAACTTCGTGAAGGTTTGTTTGCCAGGAAGCAGTGTTCCAAGGCAATTCACTTATCGAAGCACCAAGTCCTCTTTCAGAATCGTACTTCCTTACAGCTCAAAGGTGCGGGGCTTAGTTTTTTGTGCAGTTCTGTCTCCATTTGATGAAATGGAGAAGGATGGTGCTAAGATCTCATGTGAATGCTACGAATACCAAGGAAATGGCACTAAGGTGGCGTATACTAGGTGGCATCATGAAGCTATAAGGGAGTTGAAGTGTGATCATGTGTATATATGGTACGATGAATTTCTTTTTGATGGCAGTGTTGTTGGAGGTTATAAAAGGCATTTCACAGTTGAGTTCTCCGTTACAAATGGTTTGGGGGAGCGGAGTGTGTTGAACATTAGTACAAAAGAGTGTGGGGTGCGCCTAATTCTTGACTCAGACTTACCCAAATTACCAAAGTGTTTTGCTACATTCGATAGCTTCAATACTATACTTAAGTGA 3105 0.4145 MSLVVDDDKENSFLVHVEPFLPLDVFVSFRGEDTRTNFTSHLYSPLSRNGIKAYMDDEGLEKGRDVWPSLSQAIEDSHVAIVVFSKNYASSRWCLEELVKVVIPVFYEVDPAEIRNQRGVYGEAIAEHERGLLGDKSVEEVKKIVSAWKDALMEAANISGRDTRSREYKNESQVIDHIVEDVLKKLELRFPNELQVNLVGIDKSCKDVSLLLSKSKSKNVHVIGIWGLGGIGKTTVAKAVRRLSNKKALVVLDDVDDSEQLEQLCRECSYAGPESKVIITTRNKHLLRGIVDEDDIYEVKTLSFGRSVELFCLSAFKDWVPKKGYEDLSQRAVDYAGGVPLALKVLGSNLRDTSIEFWDSELNKLKDYPYDGIQKVLRVSYDGLDILEQKIFLDIAFFFKDENKYFVEKILNASGLFAVSGIKVLTNKALITISKDKKIQMHDLIRDMGLNIVRQGIKDPGKRSRLKDIEEVSDVLEYKRKGSDAIEGIKLDLSQIDDLHLNSKAFSMMSDLRYLKLYAPSGKTLGNMVYPEVLNEFSGKLSYLEWHGYGLKSPPENLFTQRLVEICMPHSHITKLWHGVKNLVSLERIDLSECKELANLPDLSKASKLKSLNLSGCESLAELHSSIWSLDALEILALDGCRKLTSLRSEKHLKSLKTISVNGCTSLREFSVSSRVMECLDLRNAGIEELHQSIQRSSKLKSLYLDKLRISNCRQLVLNKEQLHTLFNGLRCLHLLYLKDCDKLSELPNNIGCLEYLCDLRLDGSAVETLPITVKDLINLEILSLRNCKNLKYLPTLPTLIKELYTFAKEMRGSTKFISFENCTNLDGPSREGITKGANLIATNAILKNKDVEEEVRSQQYNSAPELGHSYSFNFVKVCLPGSSVPRQFTYRSTKSSFRIVLPYSSKVRGLVFCAVLSPFDEMEKDGAKISCECYEYQGNGTKVAYTRWHHEAIRELKCDHVYIWYDEFLFDGSVVGGYKRHFTVEFSVTNGLGERSVLNISTKECGVRLILDSDLPKLPKCFATFDSFNTILK* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2231 1034 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 240 962 - -
Amo09g2231 1034 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 23 239 - -
Amo09g2231 1034 Gene3D - 242 297 IPR027417 -
Amo09g2231 1034 Gene3D - 187 241 IPR027417 -
Amo09g2231 1034 SUPERFAMILY L domain-like 440 802 - -
Amo09g2231 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 240 962 IPR044974 GO:0006952
Amo09g2231 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 239 IPR044974 GO:0006952
Amo09g2231 1034 Pfam NB-ARC domain 241 382 IPR002182 GO:0043531
Amo09g2231 1034 SMART till_3 22 158 IPR000157 GO:0007165
Amo09g2231 1034 Pfam TIR domain 24 200 IPR000157 GO:0007165
Amo09g2231 1034 Gene3D Ribonuclease Inhibitor 486 650 IPR032675 -
Amo09g2231 1034 Gene3D Ribonuclease Inhibitor 651 817 IPR032675 -
Amo09g2231 1034 PRINTS Disease resistance protein signature 222 237 - -
Amo09g2231 1034 PRINTS Disease resistance protein signature 581 597 - -
Amo09g2231 1034 Pfam C-JID domain 880 1015 IPR045344 -
Amo09g2231 1034 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Amo09g2231 1034 Pfam Leucine Rich Repeat 563 581 IPR011713 -
Amo09g2231 1034 Gene3D - 21 186 IPR035897 -
Amo09g2231 1034 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 160 IPR035897 -
Amo09g2231 1034 Gene3D - 302 385 IPR042197 -
Amo09g2231 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 395 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2231 Amo-Chr9 92713112 92721436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2231 24 783 WRKY Transcription Factor Family AT4G12020 30.815 7.59e-72 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2231 - - adu:107466258 1483.39