Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2187 ACTAACTACAAAGCGCAAAATAAAACCCTAGCTTTCTCTGTTCTCACTCGCCTCCTCGCTCCGCCTCTCTGCAACACAAAAATGCCGTTCAAGAGGTTCATCGAGATCGGGAGGGTGGCCCTCATCAACTACGGCAAAGAACACGGCAGGCTCGTCGTCATCGTCGACGTTATCGACCAGAACAGAGCTCTGGTTGATGCACCTGACATGGTTAGGTCACAAGTGAACTTCAAGAGACTGTCATTGACGGACCTCAAGGTTGACATAAAGAGGGTGCCGAAGAAGAAGGAGCTGATTAAAGCCATGGAGGATGCTGATGTCAAGAACAAGTGGGAGAAGAGTTCCTGGGGAAGAAAGCTCATTGTTAGGAAGACTAGGGCTAACCTTAATGATTTTGATAGGTTCAAGCTCATGTTGGTCAAAATCAAGAAGGCTGCTGTTGTTAGGCAAGAGCTTGCAAAGTTGAAGAAGACCTCAGCTTAG 483 0.4762 TNYKAQNKTLAFSVLTRLLAPPLCNTKMPFKRFIEIGRVALINYGKEHGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDLKVDIKRVPKKKELIKAMEDADVKNKWEKSSWGRKLIVRKTRANLNDFDRFKLMLVKIKKAAVVRQELAKLKKTSA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2187 160 Gene3D - 28 111 IPR014722 -
Amo09g2187 160 CDD KOW_RPL14 34 106 IPR041985 -
Amo09g2187 160 PANTHER 60S RIBOSOMAL PROTEIN L14 28 160 IPR039660 GO:0003723|GO:0003735
Amo09g2187 160 Pfam Ribosomal protein L14 72 144 IPR002784 GO:0003735|GO:0005840|GO:0006412
Amo09g2187 160 Gene3D - 119 154 - -
Amo09g2187 160 SUPERFAMILY Translation proteins SH3-like domain 32 120 IPR008991 -
Amo09g2187 160 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 28 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2187 Amo-Chr9 91000896 91002337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2187 28 157 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.308 1.58e-75 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2187 K02875 - gmx:100499889 238.424