Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2186 ATGGGATTCAAATATCTTCCTCTCAAGCTTAAGGTTTTCCGGCTGAAACGGTTTCTGCTAGGCCGCGGCCGAAGAGGAGTAAAGAGAAAGCATGTGATGGTGCCTGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGATATTATGTGGTGGAGCATCATCAAGGTTCTGAAAAAGACCTTTTGAACTTTGATTCAGTAGTGGTGCAAAGAGAGCAAATGGATCATAATGAATTGTGGTATTTCGGAATCTTTGACGTTGTAGTTGGAGATGTGGTTACCAAGTACATTCAATCCAATTTCTTTAACAAGAAGCTTCAAGAGTCTCATTTAAGGAGGAAAAGCAAGGAAACGCTGAAGAGGGCATACCTTGGTGCAAGGGCAAAGATAAGAGAGGAGTATGAATCAGATGAAAGAAGCAGAATGGGTTCAGGATCATGTGTTATGGTGATAAATGGAGAGAAGCTTGTGATAGCAAACATGGGAGATTATAAAACTGTTGTCTGCAGAGATGGCATAGCTCATCATCACACATCATCTGGTAGACACCACCAACATTCACCAAGAATACATTGGTCTCGCAGACTCTTCTCCGGTAAAAGTCATTCTAGAGGCTCAGAACTTGTTGTGAAAGGAGAAAGGATTGATTCAGATACTGAATTTCTGATAATGGCCAGCAATGGTATATGGGAGGTGATGCAGAATCAAGAGGCAGTGAATCTGATAAGTCACATAGAGGATCCCCAAGAAGCAGCGGAATTCTTGGCAAAGGAAGCTATGAATAGGATGAGCAAAAGCAACATCTCATGCTTAATCATTCGCTTTGAGTGA 834 0.4185 MGFKYLPLKLKVFRLKRFLLGRGRRGVKRKHVMVPAKKPSWMMPITHGYYVVEHHQGSEKDLLNFDSVVVQREQMDHNELWYFGIFDVVVGDVVTKYIQSNFFNKKLQESHLRRKSKETLKRAYLGARAKIREEYESDERSRMGSGSCVMVINGEKLVIANMGDYKTVVCRDGIAHHHTSSGRHHQHSPRIHWSRRLFSGKSHSRGSELVVKGERIDSDTEFLIMASNGIWEVMQNQEAVNLISHIEDPQEAAEFLAKEAMNRMSKSNISCLIIRFE* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2186 277 CDD PP2Cc 64 276 IPR001932 -
Amo09g2186 277 Pfam Protein phosphatase 2C 215 269 IPR001932 -
Amo09g2186 277 Pfam Protein phosphatase 2C 74 186 IPR001932 -
Amo09g2186 277 PANTHER ALPHABET, ISOFORM E-RELATED 6 276 - -
Amo09g2186 277 SMART PP2C_4 45 274 IPR001932 -
Amo09g2186 277 ProSiteProfiles PPM-type phosphatase domain profile. 64 276 IPR001932 -
Amo09g2186 277 SUPERFAMILY PP2C-like 44 276 IPR036457 -
Amo09g2186 277 Gene3D - 45 277 IPR036457 -
Amo09g2186 277 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2186 Amo-Chr9 90967992 90969537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2186 1 276 PP2C-type Phosphatase Gene Family AT3G23360 46.316 8.19e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2186 K19704 - gmx:100794054 328.561