Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2103 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGATTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAAAACCAGAAATCTCCCAAATACGATCTTCCGTCAAACAAGATATTTAAAGAACAAGATTTTTTCTCTTCTATCAGAAGGTTAATAACTTTTATTAGAAGATACTTATGTAGGATACAATTATTTAGTTTTTTATAG 390 0.3538 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDVPCVQDRVFYFPQGHIELLPEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFSSIRRLITFIRRYLCRIQLFSFL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2103 129 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Amo09g2103 129 CDD UBA_SnRK1_plant 5 34 - -
Amo09g2103 129 Pfam UBA/TS-N domain 5 34 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2103 Amo-Chr9 88589778 88590832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2103 45 96 B3 DNA Binding Superfamily AT5G62000 53.846 8.08e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2103 K14486 - ahf:114925841 219.164