Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo09g2047 | ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCCGTGCTCCTGTCCGGAACAATGCTGATCGATTCCTGCATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGAAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCACTGGAACATTGTAA | 357 | 0.5014 | MEREDEDATQERRLFRRALSSLLGSIEAAAAARACRAPVRNNADRFLHWSTRFQIVLGVERGLQYLHEDSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFTGTL* | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo09g2047 | 118 | Gene3D | Transferase(Phosphotransferase) domain 1 | 34 | 118 | - | - | |
Amo09g2047 | 118 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 42 | 118 | - | - | |
Amo09g2047 | 118 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 74 | 86 | IPR008271 | GO:0004672|GO:0006468 | |
Amo09g2047 | 118 | ProSiteProfiles | Protein kinase domain profile. | 1 | 118 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo09g2047 | 118 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 | 42 | 118 | - | - | |
Amo09g2047 | 118 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 117 | IPR011009 | - | |
Amo09g2047 | 118 | Pfam | Protein kinase domain | 54 | 117 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo09g2047 | Amo-Chr9 | 85807598 | 85808289 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo09g2047 | 47 | 118 | Receptor kinase-like Gene Family | AT1G70530 | 61.111 | 2.31e-28 | 105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Amo09g2047 | Pkinase | 2.5e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo09g2047 | - | - | ahf:112703114 | 171.014 |