Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2043 ATGATCATTCCGGAGAAGAACCGCAAAGAGATCTGCAAATATCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAACCTGGCGAAGCACCCTGAGATTGAGGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTATTGGTTTCTCACCAATGATGGCATTGAACACCTCAGAACCTACCTCAATCTTCCTTCGGAAATTGTACCTGCCACTCTAAAGAAACAAGCAAAGGCTCCAGGTCGTCCATTTGGTGGTCCACCTGGCGATCGCCCTAGGGGTCCTCCACGCTTTGAAGGAGAGCGTAGGTTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGTCCTGGTGGTGATTTTGGAGGTGATAAGGGAGGGGCACCTGCAGATTACAAGCCTTCTTTTGGGGGTGCTGGTGGAAGACCAGGCTTTGGCCGAGGTTCTGGCAGTTTTGGTGGGGCACCACCATCTAGCTCAAATCTTCCATGA 546 0.5018 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKAPGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYKPSFGGAGGRPGFGRGSGSFGGAPPSSSNLP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2043 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Amo09g2043 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Amo09g2043 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Amo09g2043 181 Gene3D - 1 104 IPR036388 -
Amo09g2043 181 MobiDBLite consensus disorder prediction 112 128 - -
Amo09g2043 181 MobiDBLite consensus disorder prediction 93 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2043 Amo-Chr9 85330784 85333579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2043 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.374 6.99e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2043 K02947 - csin:114270063 216.083