Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2041 ATGGCAACGAAAGAGTCAAGCTCTGCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCGGCAACAGGGGACGCTAAAATCAAGAGGGTAGTGACCCATGGAGGCAGATATGCACAGTACAATGTGTATGGCAACTTGTTCGAGGTGACTTCMAARTATGTCCCTCCCATTCGCCCCATTGGCAGAGGTGCTTATGGCATCATCTGTGCTGCTGTGAACTTAGAGACGCACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATTATTGATGCTAGAAGGACACTCAGAGAAATCAAGCTCCTTCGTCACATGGATCATGAAAATATCATTGCGATAAAGGATATAATACGACCACCGAAAAGGGAGACATTCAACGATGTATACATTGTTTATGAATTGATGGACACTGATCTTCATCACATCATTCATTCTGACCAACCTCTCACTGATGGCCACTGTCAGTACTTCTTGTACCAGCTGTTACGGGGACTGAAATATGTGCATTCAGCGAATGTGTTGCACCGCGATCTGAAGCCGAGTAACCTGCTCATGAATGCCAACTGCGACCTCAAGATTGGCGACTTTGGATTGGCAAGGACTACTTCTGAGCAGGATTTCATGACAGAGTATGTTGTCACCCGATGGTACCGTGCCCCCGAGCTGCTCCTTAACTGTTCTGAGTACACCTCTGCCATTGATGTCTGGTCTGTGGGATGCATTCTTGGTGAGATTATGACCCGAGAGCCCTTGTTCCCTGGCAAGGACTATGTTCATCAACTTAGGCTCATTACTGAGTTGATAGGTTCACCTGACGATGCCAGCCTTGGGTTTCTCCGAAGTGATAATGCAAGAAGATACATCAAGCAGCTTCCGCAGTACCGCAAGCAAAAATTTGCTGCTAGGTTCCCCAATGTCATGCCTGAGGCACTTGATCTCCTAGAAAAGATGCTCATGTTTGATCCTAACAAGCGCATCACAGTTGATGAGGCACTTTGTCATCCATATCTAGCATCACTTCACAACATCAATGATGAGCCGGTTTGTCCGAGGCCATTCAGTTTTGACTTTGAGCATCCAACATGCACTGAAGAGGATGTCAAGGAGCTCATATGGAGGGAATCTGTCAAGTTCAATCCAGATCCACCTTCTCACTAA 1182 0.4636 MATKESSSAGSGSGSGSGSGSGSGSATGDAKIKRVVTHGGRYAQYNVYGNLFEVTSKYVPPIRPIGRGAYGIICAAVNLETHEQVAIKKIGNAFDNIIDARRTLREIKLLRHMDHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLTDGHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSEQDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIKQLPQYRKQKFAARFPNVMPEALDLLEKMLMFDPNKRITVDEALCHPYLASLHNINDEPVCPRPFSFDFEHPTCTEEDVKELIWRESVKFNPDPPSH* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2041 393 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Amo09g2041 393 SMART serkin_6 59 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2041 393 Gene3D Transferase(Phosphotransferase) domain 1 143 372 - -
Amo09g2041 393 Pfam Protein kinase domain 63 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2041 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Amo09g2041 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 392 - -
Amo09g2041 393 SUPERFAMILY Protein kinase-like (PK-like) 62 353 IPR011009 -
Amo09g2041 393 MobiDBLite consensus disorder prediction 1 28 - -
Amo09g2041 393 MobiDBLite consensus disorder prediction 1 26 - -
Amo09g2041 393 CDD STKc_TEY_MAPK 52 388 - -
Amo09g2041 393 ProSitePatterns MAP kinase signature. 94 197 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo09g2041 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 392 - -
Amo09g2041 393 Gene3D Phosphorylase Kinase; domain 1 42 382 - -
Amo09g2041 393 ProSiteProfiles Protein kinase domain profile. 59 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2041 Amo-Chr9 85324393 85326283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2041 24 388 MAP Kinase Gene Family AT4G01370 82.466 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo09g2041 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2041 - - adu:107479878 771.155