Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1992 ATGGCGGTGGATGCATGTCCTGAACAAACCTCTTCATGTTTGGAGAGAATCAAGAAGACGAACAAGAAGAGAAAAATGGAAGAAAACAAGAAACCGTCGTTTTCATGGGGATGTTCAACTGAGCTAATGATGTATGACGATCCATGGAAGCTGAAGAAGGTGCTGAACAGCAGCGACGTGGGGAGCTTGAGTAGGCTGTTGCTTCCGAAGGAGATGGCGGAGCCGCTGGTAGCAGCGGTGTTGGGGTACGATGAGAACCAGAAAGAAGGAATGGAGGTCGAGATATGGGACGTTGACACACAGTCAATGCACAGTCTTGTGTTCAAGAGATGGGGTTCTTCTAGAAGCTATGTCTTCATGGCCAATTGGATTAAAGACTTTGTCAAAAGAAGGTCTCTCAACTCCGGCCATGAGATTGGTTTCCACTGGGATCCTTACGCCAACCGCTTTGATTTCTCTGTTCTCAAAGCTGCCACAGAGGAGGATTTCTCAAACTGA 498 0.4739 MAVDACPEQTSSCLERIKKTNKKRKMEENKKPSFSWGCSTELMMYDDPWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAAVLGYDENQKEGMEVEIWDVDTQSMHSLVFKRWGSSRSYVFMANWIKDFVKRRSLNSGHEIGFHWDPYANRFDFSVLKAATEEDFSN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1992 165 Gene3D - 48 161 IPR015300 -
Amo09g1992 165 SUPERFAMILY DNA-binding pseudobarrel domain 47 152 IPR015300 -
Amo09g1992 165 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 157 - -
Amo09g1992 165 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 157 - -
Amo09g1992 165 CDD B3_DNA 49 156 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1992 Amo-Chr9 83439332 83439829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1992 47 162 B3 DNA Binding Superfamily AT3G26790 31.667 1.31e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1992 - - adu:107466113 343.969