Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1991 AGTGTTCAGAAAATAAACCATCGTTTTGATTACAAAATCGAGATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTTGAAGAAGACTTCAGAGATGAATTTACTGAGGGAGCGTTTTTTTCTGGATCTGATCAGTCAAAAGATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGACGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGAGGAGAAATATTACACGATGGAAAAAAGGAAAAAGGAGCCTAGATTAG 510 0.3765 SVQKINHRFDYKIEMSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEEDFRDEFTEGAFFSGSDQSKDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSTDEIYKQKFVCHRQGFRRRNITRWKKGKRSLD* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1991 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 158 - -
Amo09g1991 169 Pfam FAR1 DNA-binding domain 115 160 IPR004330 -
Amo09g1991 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1991 Amo-Chr9 83435889 83437524 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1991 FAR1 4.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1991 - - aip:107607217 258.07