Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1988 ATGGCTTCAGTTTCTGGCAATTACTGGAAATCACTTGATGCTAATAATGAGGATAAGGAGGTATCTAGTTTGCGCGGCATGCACTTGGATATGGACTCATTAAGTCCCAAGAACAACTGTTTAGTATCATTGACTTTGCTCCAGATTGGGCATATGCTGGGGTTAGAACAAAGAGAGGAAACTGTGATTGCACTAGTCAAATTAGGTGCAATCCCAGGTCTTGTTGATGACCCAACATCAGCATTTCCTCGAGGGGAAACAGCAGCTGATTTAGCTTCAAGTAGAGGATATAAAGGTATTGCTGGATATCTGGCTGAGGCAGATCTTATGACAATGGATGAGCAGCACTATCTAGGAGAGTCACTTGCTGCTTTTCAAAAATCAGCTTATGCTGCTGCTTCAATCCAAGCAGCCTTTAGAGCAAGATCATTCTGTCAAAGACAACTAGCCAAGAATAGCAGTGATATTTCTGAAGATGCACTTGACCAAGTTGCTGATTCTTTGAACAAGGTTTAG 516 0.4205 MASVSGNYWKSLDANNEDKEVSSLRGMHLDMDSLSPKNNCLVSLTLLQIGHMLGLEQREETVIALVKLGAIPGLVDDPTSAFPRGETAADLASSRGYKGIAGYLAEADLMTMDEQHYLGESLAAFQKSAYAAASIQAAFRARSFCQRQLAKNSSDISEDALDQVADSLNKV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1988 171 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 57 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1988 Amo-Chr9 83409665 83411417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1988 51 168 CAMTA Transcription Factor Family AT5G09410 32.692 4.70e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1988 K21596 - gmx:100818336 154.066