Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1945 TTGAGAATCACGATTATACCTCTTAATTTCACACCACACTTTTGCGATTCCACACTCATCTCCTCTAAATACTTCATCGGCGGCGCTATCAGCCTTGCACCGCCGTCTCACAAACCTCCATTGCACTCAACTTCCATCGGCCTTGCTCGCATCGCTCCCTTCCGTCGCACGGCTTCCGGGTTCTTCTTCGTCGCACCCCTTCCGTCGCTGTGCAGGGCATATGATCGAGCTGCGATCAAGTTCTGTGGCATTGATGCAGATATCAATTTCAATGTTAGCGATTATGATGAAGATATAAAGCAGATGAGTAACTTTACAAAGGAAGAGTTTAGCACATGTTCTGAGCAGAAGTATGGTGTACGAAGTTGCTATGATGAGGGGAAGCGTATGGCTGAGACTCTGATGTTTGACTATCATAGGCAACATGGCATAGAAATACGCGTTGCAAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGCCGTGTTGTTAGCAACTTCATTGCTCAAGCAATTTGGATTTTACCTGTTCAAGGACTGATTAATACCTTTGGGGATCTCCGAGGAGCTTTTGCGGCCGTTGATAGGATCAACTCTATTTTATCTGGAGTTCAAGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGTAGTGGATGATGAGAAATATAAATTATTCTTCTCTGATAGTTCAACTGAGAAAAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGCTTGGGAAATATACATGCTAA 810 0.4309 LRITIIPLNFTPHFCDSTLISSKYFIGGAISLAPPSHKPPLHSTSIGLARIAPFRRTASGFFFVAPLPSLCRAYDRAAIKFCGIDADINFNVSDYDEDIKQMSNFTKEEFSTCSEQKYGVRSCYDEGKRMAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIWILPVQGLINTFGDLRGAFAAVDRINSILSGVQVDDSLAYGLERELRQQKVVDDEKYKLFFSDSSTEKNQMHYMSALKTSSNLFSLAWLGKYTC* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1945 269 PANTHER UDP-D-GLUCURONATE CARBOXY-LYASE-LIKE PROTEIN-RELATED 118 175 - -
Amo09g1945 269 Pfam NAD dependent epimerase/dehydratase family 111 174 IPR001509 -
Amo09g1945 269 Gene3D - 95 182 - -
Amo09g1945 269 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 118 175 IPR044516 GO:0042732|GO:0048040|GO:0070403
Amo09g1945 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 176 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1945 Amo-Chr9 81793955 81796191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1945 71 110 AP2-EREBP Transcription Factor Family AT2G39250 65.000 4.93e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1945 K08678 - adu:107490448 164.851