Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1935 ATGCCAACTTTCCCCCACTATATAAACTTCTTTAATTTAGGACCTCATATTACCACAATCCAACTAAACACTACTCCTCCCACACTAGCTATATATATAGTTAACCAAGATTGGATTCATCCAAGATGCAACAAACATAGATCGTATTTGAAGGTTTTGAAGATAGTGATGGCAAATTTGTTGGTAATTGTTTTGGTGATTCATCAAGTGATGGCAAGTGGATACAGAATGGGAGCAAATGGCTTAGACATGAACTATTACTTGATGGTGGGTTGCCCTCTTGTTGAGCCTGTCGTTAAGAACATTGTTAATAGGGCTTTGCAACATGATCCTACTCTTGCTGCTGCTCTTATTAGAATGCATTTCCATGACTGCTTCATTCAGGGTTGTGATGGGTCAATCCTAATTGACTCCACAAAGGACAATACAGCAGAAAAGGACTCACCAGGGAATCTGAGCCTTAGAGGATACGAAGTCATTGATGAAATCAAGGATGAACTTGAAAGACAATGTGCTGGTGTTGTTTCGTGTGCTGATATTCTTGCTATGGCGGCTAGGGATGCTGTATTCTTTGCTGGAGGTCCAATCTATGACATACCAAAAGGGAGAAAGGATGGAAGAAGGTCGAAAATAGAGGATACTATAAATCTTCCATTCCCAACCTTCAATGCCTCTGAGTTGATTAAGGCTTTTGGGCAACGTGGTTTTTCTGCTCAAGAAATGGTCGCTCTTTCGGGGGCTCACACGTTAGGAGTTGCAAGATGTGCTTCTTTCAAGAACAGATTGAACCAAGCTGACCCAACATTGGACTCACAATTTGCCAAGACACTCTCTAGGACATGCAGCTCCGGCGACACGACAGAGCAGCCGTTCGATGCAACAAGGAACGACTTTGATAACTTGTACTTCAATGCTCTGGTGAGGAAGAATGGTGTTCTCACGTCAGATCAAACCCTCTATGCTAGCCCTTTAACAAGGAACATTGTGAATGCCTATGCATTTAACCAAGCCATGTTCTTCTTTGATTTCCAACGAGCAATGGTCAAAATGGGCCTCATTGATGTCAAAGATGAATCCAAGGGTGAAGTGCGACAAAATTGCCGCAGAATACTTTAA 1116 0.422 MPTFPHYINFFNLGPHITTIQLNTTPPTLAIYIVNQDWIHPRCNKHRSYLKVLKIVMANLLVIVLVIHQVMASGYRMGANGLDMNYYLMVGCPLVEPVVKNIVNRALQHDPTLAAALIRMHFHDCFIQGCDGSILIDSTKDNTAEKDSPGNLSLRGYEVIDEIKDELERQCAGVVSCADILAMAARDAVFFAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIKAFGQRGFSAQEMVALSGAHTLGVARCASFKNRLNQADPTLDSQFAKTLSRTCSSGDTTEQPFDATRNDFDNLYFNALVRKNGVLTSDQTLYASPLTRNIVNAYAFNQAMFFFDFQRAMVKMGLIDVKDESKGEVRQNCRRIL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1935 371 Gene3D - 91 368 - -
Amo09g1935 371 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Haem peroxidase superfamily signature 291 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 Pfam Peroxidase 99 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PANTHER PEROXIDASE 47 75 369 - -
Amo09g1935 371 PANTHER PEROXIDASE 25-RELATED 75 369 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 ProSitePatterns Peroxidases active site signature. 114 125 IPR019794 GO:0004601
Amo09g1935 371 Gene3D Peroxidase, domain 2 219 351 - -
Amo09g1935 371 ProSitePatterns Peroxidases proximal heme-ligand signature. 240 250 IPR019793 -
Amo09g1935 371 CDD secretory_peroxidase 81 370 IPR033905 GO:0004601|GO:0042744
Amo09g1935 371 ProSiteProfiles Plant heme peroxidase family profile. 81 371 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 SUPERFAMILY Heme-dependent peroxidases 91 369 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 92 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 116 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 174 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 193 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 239 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 289 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 305 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1935 371 PRINTS Plant peroxidase signature 345 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1935 Amo-Chr9 81508318 81520835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1935 54 370 Peroxidase AT4G33420 69.716 8.62e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1935 K00430 - gmx:100776019 551.977