Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1934 ATGTCCATAAAGGAGGATAATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTTGATTATCAACCAAATGCAGAAGATGATGCTGAGGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACTTGGAGTTTAGGACAGAGGATGAGGCTTGTCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGATGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAGCTTGTTTGCAATAAGGAGGGTTGGAGGAATATGAGGTATCTTGATTTGGATGATAGATCAAGTGTCCAGCTCGGCTTAGGTGTGACTGCTCTCGAGGACCTGGCCAAAGATCGACGGGTGGAAGTCGATAGAAGTAAGAATCTATTCTCGTGCTCGTGCAAGCTGTTTAAATCACGTGGTATTCCATGTAGTCATGTTTTCTGTGCCATGAAGTTCGAAAACATACTTGAATTTCTAGATTCGTTGATCTACAAAAGGTGGACAAAGAAT 582 0.4072 MSIKEDNVKNDSDNDLGDDFDYQPNAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSSVQLGLGVTALEDLAKDRRVEVDRSKNLFSCSCKLFKSRGIPCSHVFCAMKFENILEFLDSLIYKRWTKN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1934 194 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 118 - -
Amo09g1934 194 SMART 26again6 153 180 IPR006564 GO:0008270
Amo09g1934 194 MobiDBLite consensus disorder prediction 1 42 - -
Amo09g1934 194 Pfam FAR1 DNA-binding domain 74 119 IPR004330 -
Amo09g1934 194 MobiDBLite consensus disorder prediction 1 16 - -
Amo09g1934 194 ProSiteProfiles Zinc finger SWIM-type profile. 142 178 IPR007527 GO:0008270
Amo09g1934 194 MobiDBLite consensus disorder prediction 17 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1934 Amo-Chr9 81504225 81506023 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1934 FAR1 1.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1934 - - adu:107460934 231.106