Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1932 ATGACGTCTTCGAAGGACAAGGGTAAGAGAAAGCTACCGATGGATCAAGGTACCACACAGAACTACAAGTTGAGGTTTCTGAAGCCAGTAATAAGGCCATCAATGTTCAAACTGTCATTACCTATAACTCCGGATGAGCTCCCAAACCATTCCTCGTACCTGGACCTAGTTGTGCCTGACGGAAGGAATAACCCCTTTCGATGCTTTTGGTCACCAATCCAAAGTGGCAAAATTGTATTGACTCGTGGCTGGCAAGAGTTCTACCAGACGTACAAAATCAATCTGGACTCCATGCTCTATTTCACACACAAAGGAAACTCCAATTTCCAAGTCTGGATATTTGATTTTGGTGGCATTGAGAATTCATACCAACTCCGTGATCCTGAAGAACCACCATATCCTAATGTCCCTCATCTCAGTCACTTCACTGGTCAGAGGCACCCTATCATCCTTACACACGGCCACATAGAGGTCGAAGTTACATATACAAGGTACAGTGGAAAAAGGGACGGTAGCTTTGGTGTTATTTCTGGAGGATGGGAGAACTTTGCTTCATTGTGCAACTTCAAGCCAGGTGGTGTGAGAATCTTCGAGGTGATATCCACTGAGCCAGTGACGATCATCCAGGTTCGATGCAGATAG 642 0.4533 MTSSKDKGKRKLPMDQGTTQNYKLRFLKPVIRPSMFKLSLPITPDELPNHSSYLDLVVPDGRNNPFRCFWSPIQSGKIVLTRGWQEFYQTYKINLDSMLYFTHKGNSNFQVWIFDFGGIENSYQLRDPEEPPYPNVPHLSHFTGQRHPIILTHGHIEVEVTYTRYSGKRDGSFGVISGGWENFASLCNFKPGGVRIFEVISTEPVTIIQVRCR* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1932 213 SUPERFAMILY DNA-binding pseudobarrel domain 31 117 IPR015300 -
Amo09g1932 213 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 65 129 - -
Amo09g1932 213 Gene3D - 18 116 IPR015300 -
Amo09g1932 213 Gene3D - 134 212 IPR015300 -
Amo09g1932 213 PANTHER B3 DOMAIN-CONTAINING 65 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1932 Amo-Chr9 81476585 81477556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1932 45 124 B3 DNA Binding Superfamily AT3G18990 37.500 8.57e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1932 - - adu:107488680 365.925