Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1923 ATGCCTACCATGAAGAAGAATTCTGAACAAACATCCTTTGGGTTAGTATTTAGCAAATTGGCAGAGGAGATTGGTGAACCTGTCGACTTTGAACTTCCAGAATGGTTTAATAAGTGCAAGCCAATGCCAGTAACATTTATAAAACGCAATATCTATCTGACAAAAAGGGTTAAAAGAAGGCTTGATGACGATGGCATATTTTGTTCTTGTACATCATCACCTGGATCTTCTGCTGTATGCGGTAAAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGGTTTCCTGTCTTAACAAACCATTCCAGCATCGACCCATCAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGAGAATTTGTGATAGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGATTATGGAACATGAAACTTCGTGGGGTGACAAACTTCTACCTATGTGAAATAAATCGAGATATGGTGATCGATGCAACATATAAAGGAAACAAATCAAGATATATAAATCATAGTTGCTGTCCTAATACTGAGATGCAGAAATGGATAATTGACGGTGAAACGAGAATTGGCATATTCGCAACGCGCGACATAAGGAAAGGCGAACATCTGACATATGATTATCAGTTTGTCCAGTTTGGTAGATCTGACAAAGATCCAAAAAAGAGGACTACGAAAAATAACTTAAAGGAGACCAACATAACCAAAGTCTGGGAAGGTGTTACATCTAGTTCACGGCAGAGAAGTTGA 816 0.3885 MPTMKKNSEQTSFGLVFSKLAEEIGEPVDFELPEWFNKCKPMPVTFIKRNIYLTKRVKRRLDDDGIFCSCTSSPGSSAVCGKDCHCGMLLSSCSSGCKCGVSCLNKPFQHRPIKKMKLVQTEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWNMKLRGVTNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGRSDKDPKKRTTKNNLKETNITKVWEGVTSSSRQRS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1923 271 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 271 IPR025787 -
Amo09g1923 271 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0018024
Amo09g1923 271 SUPERFAMILY SET domain 27 235 IPR046341 -
Amo09g1923 271 Gene3D SET domain 33 258 IPR046341 -
Amo09g1923 271 PANTHER SET DOMAIN PROTEINS 1 239 - -
Amo09g1923 271 Pfam SET domain 125 230 IPR001214 GO:0005515
Amo09g1923 271 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0018024
Amo09g1923 271 SMART set_7 114 237 IPR001214 GO:0005515
Amo09g1923 271 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Amo09g1923 271 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1923 Amo-Chr9 80735470 80747973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1923 87 230 C2H2 Transcription Factor Family AT2G23740 35.000 5.19e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo09g1923 SET 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1923 - - gmx:100808183 440.269