Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1915 ATGAGGATAGGACTTCTAATTCTCATACATTATTTTCTCTCGGTCGGGTTTGTGCATTGGGATCTGTTTATTAGCCGTACAAAAACCGTAGCCGGACCATTTTCACTGAGAGGATCATACAGCTTTCCATGGAAGGGAGGATTCAGTACGGGCTTTAGGCAGGGTTTTGGTAAAATTGGAACTTGTGTTATACTTGGGTGCTACAGTCGAGAGCTGCTCATAGGAATATATGAGAAGGATTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTAGTATTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAATAGCTGCATTTTGCATTCCAACATTGGAAAAAATTGACCAGGATAACAACTCGCCATCGCCGGAGTTTTGGTCGCCGCTGTCGCTTGAGATAGTTGTCAAAGCTACTATTAGGTTGAATCAGAGGGCTAAGTTTGTGGTTGCCGTTGGTTTTGGGTTGAGACAAAAGATTCCGTTGACACGTTTGGGTTATGGTTTCGATGAGTCGAGTAAAGTATGA 552 0.4275 MRIGLLILIHYFLSVGFVHWDLFISRTKTVAGPFSLRGSYSFPWKGGFSTGFRQGFGKIGTCVILGCYSRELLIGIYEKDFERPSPIQEESIPIALTSIDILARAKNGTGKIAAFCIPTLEKIDQDNNSPSPEFWSPLSLEIVVKATIRLNQRAKFVVAVGFGLRQKIPLTRLGYGFDESSKV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1915 183 Pfam DEAD/DEAH box helicase 86 126 IPR011545 GO:0003676|GO:0005524
Amo09g1915 183 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 69 129 - -
Amo09g1915 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 129 IPR027417 -
Amo09g1915 183 Gene3D - 67 160 IPR027417 -
Amo09g1915 183 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 69 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1915 Amo-Chr9 80258344 80267818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1915 71 140 Eukaryotic Initiation Factors Gene Family AT5G11200 42.857 4.33e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1915 K12614 - jre:109009037 108.227