Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1866 ATGGAGCGAGAGAGCACTCGGAGTAGATCCATCCGAATCTGGAAACACGAAGTGTTTGTGAGTTTCAGAGGCGAGGACACTCGCAACAACTTCATCGATCATCTCTTCGCCGCTTTCGATAGAAAAGGCATAGACGCATTCAAAGACGATATAAATCTGAAGCAGGGAGGGCACATTTCAACTGAGCTAATGGAAGCCATAGAAACTTCGACGGTTCTAATGGTGGTGTTGTCCAAAAACTACGCTTCCTCCACATGGTGCTTGCGGGAACTAGAAAAGATCCTGGAGTGTGCCAAGGTGCACAAAACATCACAGACTGTTCTTCCAGTCTTCTATGATGTGACTCCATCTGAGGTGAGAACGCAGAGCGGAGATTATGAGAAAGCGTTTGCCGAACTTGAGAGAAGATTCGAACGAGATTTGGGGATGGTGCAAAAATGGAGGGAAGCTATGGCACAGGTGGCTGCATTCTCTGGTTGGGATGTGCAGAACAAGCCGCAACACACTGAGATTGAAAAAATTGTTGAAAGAGTAATAGATATTCAACATTGCAAATCATCAAATTTAGATGGTTTGGTGGGGATGCATCCGCGTGTGGAAGAACTAGAAAAGCTTTTGGACTTTGACTGTAGTAGCGATGACGATGATGTTCGAGTTACAGGCATATGTGGGATGGGCGGAATAGGAAAGTCAACGCTTGCTAGAGTTGTATTCCAAAGAAACTTGCATCGATTTTCTGTTACTTGCATTCTTGATAACCTGAGTCAAGTTTTTCATCGTGATGGTCTTGTTGGGGCGCAAAAGCTACTTGTTTCTCACATTCTAAAAGATGAAATGCAACATATGTGGAGTCTTTCCAAGGCAATGAGATTGATGAAAGCTAGATTGTGCCGTGTGAAGGCTCTTATTGTTTTAGATAATGTTGATAGCGAGGACCAACAATTAGAAGAACTGGGTTTGAATCCCGAATACTTATTTCCTGGGAGTAGAATCATCGTAATTTCGAGAGATAAGCATATCTTAAAGATGAGCGGAGTGGATGAAATTTATGAGGCTCAACTTTTGAACAAGGAGGAATCATATCAATTGTTTTGTAGAAAAGTTTTTAGAAGAAATAATTTCATGTTACAGCATTGTGACGAATTATTGGTAGATGGAGTATTAAAATATGCTCAAGGCCTTCCTTTGGCAATTGAAGTTTTGGGATCATTTCTAAAAGAGAGAAGTATGGATTCATGGAAATCTATCTTGTCTGAGATGAGAGTTTGTCCACCACATGAGGAAATTATGGACGTGCTTAAAATTAGTTATGATCAATTAGATTGCATGGAAAAGCAAGTATTTCTTGATATTGCTTGTATCTTTCATGATGGTAGTGATAAGGAAGAGGTAATGAGAATTCTAGATTGTTGTGGATTCTTTGCAGACATAGCAGTTTGCAACCTTCATGATAAATCACTTATAACCATTAATAAGAATGAGGGTATTGAAATGCATGGCAAGCTCCGGGAGCTAGGCATGGAAATTGTTAGAAAGGAAGCACTCATGGAGCCAGGAAAGAGAAGCAGGATATGGCGCTTTCAGGATTTCCTAAATGTTTGCGAAAATAAGGCAATGGATTACGTTGAAGCCATACGCTTGGAATCACAAACAATGGATGAGAAAAATACAACGCTAAGTGTAGAAGCATTATCAAAAATGAATCAACTTAGACTGCTGAAAATCAATGATGTGAAGTTTTCAGGAAACCTAAGCTGCCTTTCCAGTAAATTGCGATATCTTGAATGGGCAGAATATCCTTACACATATTTTCCACCAAGTTGTGAGCCGTCTAACCTTGTTGAGTTATCCTTACCACATAGTAGCATCAAACAACTATGGAATGACATAAAGTGTTTGTACAATTTGAAATCTGTAGATCTCCATGGCTCTCAAAATCTTATCAAAATCCCAGACTTTAGCAAAGCCCCAAATCTTGAGATGCTGAATCTTGAGGGGTGCACAAAACTTGTGCACATTCATCCATCAGTTAGATTTCTAGAAAAACTCAGTTATTTGAATTTGAAGAATTGCACAAGTTTAGTGAGCATCCCCAATCGTATATTAAGTATAAGTTCGCTTCAAGTCGTAAATCTTGCAGGTTGCTCAAAATTATGGAAACATAGTAGGAAGCAAAGCTAA 2181 0.3961 MERESTRSRSIRIWKHEVFVSFRGEDTRNNFIDHLFAAFDRKGIDAFKDDINLKQGGHISTELMEAIETSTVLMVVLSKNYASSTWCLRELEKILECAKVHKTSQTVLPVFYDVTPSEVRTQSGDYEKAFAELERRFERDLGMVQKWREAMAQVAAFSGWDVQNKPQHTEIEKIVERVIDIQHCKSSNLDGLVGMHPRVEELEKLLDFDCSSDDDDVRVTGICGMGGIGKSTLARVVFQRNLHRFSVTCILDNLSQVFHRDGLVGAQKLLVSHILKDEMQHMWSLSKAMRLMKARLCRVKALIVLDNVDSEDQQLEELGLNPEYLFPGSRIIVISRDKHILKMSGVDEIYEAQLLNKEESYQLFCRKVFRRNNFMLQHCDELLVDGVLKYAQGLPLAIEVLGSFLKERSMDSWKSILSEMRVCPPHEEIMDVLKISYDQLDCMEKQVFLDIACIFHDGSDKEEVMRILDCCGFFADIAVCNLHDKSLITINKNEGIEMHGKLRELGMEIVRKEALMEPGKRSRIWRFQDFLNVCENKAMDYVEAIRLESQTMDEKNTTLSVEALSKMNQLRLLKINDVKFSGNLSCLSSKLRYLEWAEYPYTYFPPSCEPSNLVELSLPHSSIKQLWNDIKCLYNLKSVDLHGSQNLIKIPDFSKAPNLEMLNLEGCTKLVHIHPSVRFLEKLSYLNLKNCTSLVSIPNRILSISSLQVVNLAGCSKLWKHSRKQS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1866 726 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 718 - -
Amo09g1866 726 Gene3D - 354 441 IPR042197 -
Amo09g1866 726 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Amo09g1866 726 Gene3D Ribonuclease Inhibitor 530 724 IPR032675 -
Amo09g1866 726 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 718 IPR044974 GO:0006952
Amo09g1866 726 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Amo09g1866 726 Pfam NB-ARC domain 203 438 IPR002182 GO:0043531
Amo09g1866 726 SUPERFAMILY L domain-like 555 716 - -
Amo09g1866 726 Gene3D - 184 349 IPR027417 -
Amo09g1866 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 451 IPR027417 -
Amo09g1866 726 PRINTS Disease resistance protein signature 391 405 - -
Amo09g1866 726 PRINTS Disease resistance protein signature 702 718 - -
Amo09g1866 726 PRINTS Disease resistance protein signature 219 234 - -
Amo09g1866 726 PRINTS Disease resistance protein signature 295 309 - -
Amo09g1866 726 SMART till_3 15 157 IPR000157 GO:0007165
Amo09g1866 726 SUPERFAMILY "Winged helix" DNA-binding domain 428 533 IPR036390 -
Amo09g1866 726 Pfam TIR domain 15 187 IPR000157 GO:0007165
Amo09g1866 726 Gene3D - 10 183 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1866 Amo-Chr9 77340783 77344753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1866 16 718 WRKY Transcription Factor Family AT4G12020 31.674 1.55e-81 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1866 - - adu:107466020 1044.26