Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1822 CGCTCGGATGCTGGAAAATTTTACAAGGACTGCGCCAAGGCTGTAGGTATTTCTACAAGAGTTCGGAGTACAAATAGGAAGGGAAACGAGATTAAGAATCAGTTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCAAGAAGACAAATCCCACAGCCGATTTAAACTGTCCAGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCAGCATCATTCACACCCTTGTTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAATGAGGAGGCTGGGATGAGAAGCACACAAAGGAKCGAGAGCATGCATTTATTTTTTAACAAGTTTATTACCCRAAACAGCTCACTTATTCAATTTGTCAAACAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTRCAAATTTTCATACGTTTAGGGAAGTCCAAGAACAATTCAGAGGAAAGGTGAATTGCATCACTAGATTAACGAATTCCRCTCTAGGCTATTCAGTATACGAAGTTGAACAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTATGACTCAGTAGCAGCCGAGGTAAAAAKTCAATGCTTATTATTCGAGTCAAGAGGGATATTGTGCCGTCACGCACTAAGGGTGTTAAGCTTTGAACAAGTAAGCCAAGTGTCACCTAGATATATACTGGAACGATGGAGCAAGAAGGTAAAGAGGCGACACACACACATYAAGAGCAGCCACGACGWGCCACTATTGGAGCCAGGAAGCAAGAGGTTTCACGAATTAGTTTTTCGTTCGCAAAATATTTGTGAATTTGCATCAGAATCGGAGGAGCTGATTGCAATTTTGTACCGTGCATACGATACCGTCATGGTGGAGATGGAATCATTGAAAGCCAAAAGGAAGGGGASATCTTCTTTATCTCACGAAGACGCCAACTTGGAATCCATTAACGAGCTTCAAAGCCCTCCAAGGATTCGAACAAGAGGACGTCCAAAAAAATATGCTAGGTTCAAAGTTGGACAAACAGATTGTAAATGCCTCAAAGAAGAAGAAGAAAACGAAAGCTTTAAACGACGTAAAAGTGATGTTTTTTAA 1188 0.4066 RSDAGKFYKDCAKAVGISTRVRSTNRKGNEIKNQLITCSREGKWKSKISPTKKTNPTADLNCPARIYIHTLKDVGAWIISKVVQHHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAGMRSTQRXESMHLFFNKFITXNSSLIQFVKQYDNCLGSREQAERESDAXNFHTFREVQEQFRGKVNCITRLTNSXLGYSVYEVEQQVSSSIFNKFVVTYDSVAAEVKXQCLLFESRGILCRHALRVLSFEQVSQVSPRYILERWSKKVKRRHTHIKSSHDXPLLEPGSKRFHELVFRSQNICEFASESEELIAILYRAYDTVMVEMESLKAKRKGXSSLSHEDANLESINELQSPPRIRTRGRPKKYARFKVGQTDCKCLKEEEENESFKRRKSDVF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1822 395 PANTHER OS03G0843700 PROTEIN 122 297 - -
Amo09g1822 395 PANTHER OS03G0843700 PROTEIN 6 103 - -
Amo09g1822 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 122 297 IPR031052 GO:0006355
Amo09g1822 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 103 IPR031052 GO:0006355
Amo09g1822 395 Pfam FAR1 DNA-binding domain 6 91 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1822 Amo-Chr9 75822821 75825311 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1822 FAR1 8.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1822 - - adu:110280503 412.149