Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1799 ATGGGTTTTCAAAAATCTTTAGAAAGTAAAATTGGGGGAATTTGCATTTATTCTGCCCTGCAGAGGATTTTATTTAACCCAACCCTCGCAGCATCAACATTGCCTTGGGACTCTACCACCCACGCCTCTCCCTCTCCAGCAGCACCACGATGCGTCGATTCCTCTGCCGGAGGTTCTGGTGGCGGTGGCACAACCCCCTCATCGGAGCCTCTGGCCAAGAAGCACAGAGGGAGGCCTCCTGGCTCCGGCAAGAAGCAGATGGATGCGCTTGGAGCTGGTGGCATTGGTTTTACTCCGCACGTGATCTTGGTGGAGTCTGGTGAGAAAATGAGCATGAAGCTGAGCCTCTTCATATTTGCTTTCATGATCATTGGAGCAATGTTCTTTGGTGCTGAGGCTGAACCATTGGAAGATGAACAAGCTTTGCTTGATTTCTTTCACAAAATTGATCACTCAAAGCATCTCAATTGGGGTTACAAGACTTCTCTATGCAAGAAGCTGGACAGGAGTAAAATTGGTCACTGGTTCAATTCCTCATGTCATCTTCTTACAGTGGATATGGCACCTCCAACTTGCAACAAGTAA 585 0.4786 MGFQKSLESKIGGICIYSALQRILFNPTLAASTLPWDSTTHASPSPAAPRCVDSSAGGSGGGGTTPSSEPLAKKHRGRPPGSGKKQMDALGAGGIGFTPHVILVESGEKMSMKLSLFIFAFMIIGAMFFGAEAEPLEDEQALLDFFHKIDHSKHLNWGYKTSLCKKLDRSKIGHWFNSSCHLLTVDMAPPTCNK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1799 194 PANTHER PPC DOMAIN-CONTAINING PROTEIN-RELATED 53 117 - -
Amo09g1799 194 MobiDBLite consensus disorder prediction 38 89 - -
Amo09g1799 194 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 53 117 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1799 Amo-Chr9 74416918 74418884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1799 62 117 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 61.404 7.45e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1799 - - aip:107620117 124.79