Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1788 ATGAAGGTGATGAGGAAGGAGACCATCATCAAGAAGAACCATGTGGATTACATGAAAGCTGAGAGGGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAACTTCGCTACTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTCTATCGACAGGGCATCTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAATGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATGGTGATGGGCATGTGATGCTAACTGATTTCGGATTGTCGAAAGAGATTGACGAATCAGGAAGATCCAACTCTATGTGTGGGACCATGGAATATATGGCTCCGGAAATCATACTGGCCAAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGAGAAAGTTAAACTTCCACCAACGGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAACGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAGAACTCAAACCTAAGTTCAAACCAGATGTCTCCGGTAAAGATGTACAGCTAACTTTGACCAATGCTGGACGGCAATGCCTCCAGATGACTCACCAGCTTCCACTCCCACGGCCGGTGACCATTTCCATGGCTACACGTATGTCGCACCAAACCCTTGGCTTTCATCCAAATAGACTGAACTGCCAAAGGCGGTCATACCGGAGAGGATGTGTATTATATGGAATGGATGTATAA 954 0.434 MKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDGDGHVMLTDFGLSKEIDESGRSNSMCGTMEYMAPEIILAKGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKEKVKLPPTVSTEAHSLLKGLLQKDPSTRLGNGPNGDEQIKSHKWFRPINWKKLEARELKPKFKPDVSGKDVQLTLTNAGRQCLQMTHQLPLPRPVTISMATRMSHQTLGFHPNRLNCQRRSYRRGCVLYGMDV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1788 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Amo09g1788 317 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 258 - -
Amo09g1788 317 Gene3D Transferase(Phosphotransferase) domain 1 53 248 - -
Amo09g1788 317 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 258 - -
Amo09g1788 317 CDD STKc_AGC 1 229 IPR045270 GO:0004674|GO:0005524
Amo09g1788 317 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1788 317 SUPERFAMILY Protein kinase-like (PK-like) 1 296 IPR011009 -
Amo09g1788 317 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1788 317 Pfam Protein kinase domain 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1788 317 Gene3D Phosphorylase Kinase; domain 1 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1788 Amo-Chr9 73339998 73343642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1788 1 253 AGC Kinase Gene Family AT3G08720 74.308 6.82e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Amo09g1788 Pkinase 5.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1788 K04688 - gmx:100798259 476.092