Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1785 ATGAATGATTCAACTTCAAATCAGCTGAATGAGAGCAAATTGGATTATTCTTCTGAAATGAATCAAGCTAACGAGACCAAGTGTGCTGTGGATGAACAATTTGTCCCAAAGGTGGGAATGATTTTCAAGACACTAGAAGAAGCCAGAAAGTTCTACAAATATTATTCCAAACTTGCCAGTTTTTCTACCAAAATAAGGAACACGACTCAGGAGGGAGTCAATATTAAGAATCAACTAATTGTATGCAGCAGAGAGGCGAGGTGGAAATCCAAGATATCTCCAACTCTGAATACAAACCCCTCAGTCGGCATAAACTGTCCAGCCAGGATATACATACACATATTGAAGGACGTCGGTCTCTGGACAATTTCCAATGTCATTTTGAATCACTCACACCCCTGCTATCCAAACCGCACAGAGATGTTCAAACAACACAGGGAGCTAAGCATATCATCATATATGGATTCCAGTTTACTGGATCACCACTTCTGGGATGAGATGAGAAGTGCACAAAGTTGCGAGAGCATGCATGCATTTTTCAACAAGTTCATCAAATGCAACAGCTCTTTGAGTCAATTTGTGAAGCAATATGACAATTGCCTAGCAAGCAGAGAGCAAAGAGAGATAGAATTCGACACTATAGAATTTTACACGGTGATACTGTGCGCAACAAAATCAACAATAGAGGTGCAATTTCAGCACATGTATACCCACGAGAAGTTCAGGGAAGTTCAAGGATAA 741 0.4022 MNDSTSNQLNESKLDYSSEMNQANETKCAVDEQFVPKVGMIFKTLEEARKFYKYYSKLASFSTKIRNTTQEGVNIKNQLIVCSREARWKSKISPTLNTNPSVGINCPARIYIHILKDVGLWTISNVILNHSHPCYPNRTEMFKQHRELSISSYMDSSLLDHHFWDEMRSAQSCESMHAFFNKFIKCNSSLSQFVKQYDNCLASREQREIEFDTIEFYTVILCATKSTIEVQFQHMYTHEKFREVQG* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1785 246 Pfam FAR1 DNA-binding domain 50 135 IPR004330 -
Amo09g1785 246 PANTHER OS03G0843700 PROTEIN 13 143 - -
Amo09g1785 246 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 159 245 IPR031052 GO:0006355
Amo09g1785 246 PANTHER OS03G0843700 PROTEIN 159 245 - -
Amo09g1785 246 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 143 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1785 Amo-Chr9 73181496 73183811 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1785 FAR1 9.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1785 - - adu:107470220 249.21