Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1777 ATGGAAATTCTAAGCTCTGTTGCTGGAAAAGTAGCAGAGTATACTGTGGCACCCATTGGAAGGCAATTCAGCTATCTAATATTCTATAAAGCCAATTTTAAGGAGTTAAGTAAACGTGTTACAGATCTTGAGGGCAAAAGAGATGAAATCAAGCAACGTGTTGAAGAAGAAAGAAGGAATGGGAAAACAACTTTTGATGTTGTGCAGAATTGGTTGAACAATGTAGATGATGCCATTGGAGAGGCAAATCAGCTTCAAAATGATCCTCGTCATGCGAAGGTTGGGTGTTCCAGATGTTCATTTCCTAATGTGGTGACACGTCATCAACTCAGTAGAAAAGCTACGAAAATTGTCAAAAATGTTGTTGATATAAAGGGAGAAGGGAACTTTTCCGAAGTAGCTTATCTTCCTGCTCTTGATGTAGTCTCAACATCTACTACAAGGAGTAATAAAAACTTGGAGTCAAGGAAATCAATTACGGAGAATATCATGCATGCTCTAAAAGATCCCAAAGTAAGCATGGTGGGAGTGTATGGGCTTGGTGGTGTGGGTAAGACCACTCTTATGAATGAAGTTGCTCAAATAGCTAAGCATGAGAGGTTGTTTGATGAGGTGGTCATAGCCACTGTGTCAAAAACTCCAGACATCAAAACAATTCAACAGGAGATTGCTGATCAGTTGGGCCTTCATTTCAGGGACGAGAGTGTTGCTTGTAGAGGGAAGCGCCTACATGACAGAATTAAAACAGAGAGATCAATCTTGATAATATTGGATGATATATGGGCAAGACTTGATTTGGAGATGCTCGGAATTCCTTCTGGCAGTGAACATGGTAGTTGCAAATTGTTAATGACTTCTCGAAATAAAGATGTGCTGCAAGTAATGGATGTTCAAAAGGATTTCAAACTTGATGTTTTAAGTGAGGAAGAAAATTGGATCATGTTTGAATCTCTGGCTGGGGATACTGTACATGATATCAATATAAAAGGAACAGCAATTGAAGTTGCAAAAAGATGTGCAGGTTTGCCTCTTCGGCTGGTAACGGTTGCGAGGGCATTGAAAAATAAAAAACTTTATGCCTGGAAAGATGCATTAACCCGGTTGGATGGTTCCAATAGTGGAGACATGGATGCGGTCACTTATTCAGCACTGGAATTGAGTTACAATTGGTTGGAATCTGATGAGATGAAGGATGTATTCTTGCTTTGTTCCGTAATGCGATCCTTTCTTTTACCAGAGTACATAGTGACATGTGCCATGGGTTTAGACCTATTTAAGGGAATAAACACACTGGGCGCTGCAAGAAATAGGGTATACAGAATACTTGACACCTTGAAGGCCTCCTCTCTGTTGTATGAAGGTCGCATGTATTCTTGTCTGTTGTATATGCATGACATTGTTCGAGAAGTAGCTGTATCCATAGCAAAACGGGATCGCCATGTTTTTACAACGAAGTATGGAGATGCCTTAAAGGAATGGCCGACAGAGGGATTTCTAAGAAGCTGCTCCCAGATTGTCCTGGATAATTGCATCATCAATAAGCTTCCTGAAAAGTTAGATTGTCCTAATCTTTTGCTTTTTGTATTGAATAGTGCTGATCGTTTTCTGGAAATCCCTGATTCTTTCTTTGAGGGAATGAAAAGCCTCAAAGTGTTAGAATTGAGATTCATAAACTTGTCTTTGTTACCAACATCTATTTTTGGGCTAATTAGCCTTCAAACATTGAACTTGTTTATATGTGTTCTACAAAGTATGGATGGAATAGGAGCTTTGAAAAATCTAGAAATTCTTAGCCTCTGCTGTTCTTCCATGATAAACTTTCCTAGTGAAATTGGTCAGTTGACTAAGCTAAAAATGTTAGATTTGTGCTACACTGGAATTGAAGTCATCCCGCAAAACTTCATATCAAGATTGATCAGTTTGGAGGAGTTTCACATGACAGATATTTCAATTGATTGGAATGATGAAACCAGCCTTGATGAATTCCGACAGTTGTTGAACTTGACAACTCTACGATTACAAGTTCGTGAGGCTTGCATTTTGCCAAGTGATCTGATGTTTGATAAATTAGAAAGGTACAATATAGCTATTGGAGATGTCTGGGAAGAGTCTGATATTGACGACGGAACATGGAAAACATTGAAGCTCAAGCTTGGCACCAATATTCACTTGGAGCCCGGGATCAAAGGATTGATCAGAAGAGCAGAGAATTTGTATTTGGATGAAGTTGGAGGCATTTCGAATGTACTCTATCAATTGAATGGAGACGGATTTCCTCAACTGAAGCACCTCCACATCCAAAATAATGCCTTAATTCAGCACATCATTGATTTTAAAGAGAGGACTCATGTTCCATCCCCCTCATTTCCAAACCTGGAAAAACTGGTCATTCAGAATCTCGATAAGATGGAGAAAATTTATGATGGGCCACTTGCAAACAATTCTTTTGCCAAGCTCCAGGCCATCAAAGTTGAAAACTGTAATAAAGTGAAATATCTAGTTAAAAGCATGTCTCAGCTTTCAGAGCTCGAAGTTTCTCGATGCAAACTTATGGAAAGGATCGTGTTTGAAGATGGTGATGCAAGTGCAATGAATGACGAAACTGTTGAAACCATTCAGTTTCCATTGCTCCATTCTCTAACTTTACAACATTTGGATGAGCTTAAAAGTTTCTTTTCTCATCAGCCAACATCTTCTGCTATACCCCTTTTTAACAATCAAGTAAGTGTTTTACCTTCTATTCTTGTTTCAAATCTTTACGCGCATACAGTTTATTACATAACCCCTACAAATTTTGAAATAGCATTGAATGCAAAGGTTGCATTTCCTAATTTGGACACTTTGAAGTTGAGCTCACTCAATTTGAGCAAAATTTGGAAGGATAATCGACACTCTTTTTACAAATTGACAAATTTGATTGTTGAAAATTGTGATGGTCCAAAGTATTTGTTCTCTTCTACTATGGTGGAGAGTTTTTCCAACCTCATAAAGCTTGAAATAAGTGAATGCCATCTAATGGAGGAGATAATAGATCCGGTAGACAGGGACAACAATATTATCACGCTAGAAGAGGTTCGATTCTCCAAATTGCAAACAATTATCTTAAAGGACATGAAGAGTTTGAAGAAGATATGGTACAAAGAATTTTCTAAAGTGAAGACATTACAAGTCAACAATTGTGAGAAAATTAGAGTAATTTTTCCTTCTTCGATGCAGAAAGCATATAATGATCTAGAGGCATTAATGGTAATCGATTGTGTTTCAGTAGAAGAGATATTTCAACTGAGTTCTGATGAAAATTGTAATACAGAACGAACACAACTTAAAAAAATTACTCTAAAAAAATTGCCAAAGCTAAAACAAATATGGAGCAAGGATCCTGAAGGAACTCTTTGCTTTTGCAATCTAGAGGAAATATATGTAGAGAACTGCGAAAACTTGGAATTTGTATTTCCATGTTCAGTAGCCACAAGTTGCTCGCATCTTAAAGAACTTTCAATTAAATGGTGTGGAAACATGAAGGAAATTGTTGCATTGAAGGATGAACCGACGGTCTCAACTACTTCCTTTGAGTTTAACCATTTAAACACTTTGTTGCTTTGGAGGTTATATAATCTCAAAGGGTTCTATGCAGGAAATCACACATTAACATGTCCATCTTTGAGAAAATTAGATGTTACACTATGTGTGAAATTAAATTTGTACAGAACCCTTTCTACAATCAAGAGCATTCTTAAACTATGA 3744 0.375 MEILSSVAGKVAEYTVAPIGRQFSYLIFYKANFKELSKRVTDLEGKRDEIKQRVEEERRNGKTTFDVVQNWLNNVDDAIGEANQLQNDPRHAKVGCSRCSFPNVVTRHQLSRKATKIVKNVVDIKGEGNFSEVAYLPALDVVSTSTTRSNKNLESRKSITENIMHALKDPKVSMVGVYGLGGVGKTTLMNEVAQIAKHERLFDEVVIATVSKTPDIKTIQQEIADQLGLHFRDESVACRGKRLHDRIKTERSILIILDDIWARLDLEMLGIPSGSEHGSCKLLMTSRNKDVLQVMDVQKDFKLDVLSEEENWIMFESLAGDTVHDINIKGTAIEVAKRCAGLPLRLVTVARALKNKKLYAWKDALTRLDGSNSGDMDAVTYSALELSYNWLESDEMKDVFLLCSVMRSFLLPEYIVTCAMGLDLFKGINTLGAARNRVYRILDTLKASSLLYEGRMYSCLLYMHDIVREVAVSIAKRDRHVFTTKYGDALKEWPTEGFLRSCSQIVLDNCIINKLPEKLDCPNLLLFVLNSADRFLEIPDSFFEGMKSLKVLELRFINLSLLPTSIFGLISLQTLNLFICVLQSMDGIGALKNLEILSLCCSSMINFPSEIGQLTKLKMLDLCYTGIEVIPQNFISRLISLEEFHMTDISIDWNDETSLDEFRQLLNLTTLRLQVREACILPSDLMFDKLERYNIAIGDVWEESDIDDGTWKTLKLKLGTNIHLEPGIKGLIRRAENLYLDEVGGISNVLYQLNGDGFPQLKHLHIQNNALIQHIIDFKERTHVPSPSFPNLEKLVIQNLDKMEKIYDGPLANNSFAKLQAIKVENCNKVKYLVKSMSQLSELEVSRCKLMERIVFEDGDASAMNDETVETIQFPLLHSLTLQHLDELKSFFSHQPTSSAIPLFNNQVSVLPSILVSNLYAHTVYYITPTNFEIALNAKVAFPNLDTLKLSSLNLSKIWKDNRHSFYKLTNLIVENCDGPKYLFSSTMVESFSNLIKLEISECHLMEEIIDPVDRDNNIITLEEVRFSKLQTIILKDMKSLKKIWYKEFSKVKTLQVNNCEKIRVIFPSSMQKAYNDLEALMVIDCVSVEEIFQLSSDENCNTERTQLKKITLKKLPKLKQIWSKDPEGTLCFCNLEEIYVENCENLEFVFPCSVATSCSHLKELSIKWCGNMKEIVALKDEPTVSTTSFEFNHLNTLLLWRLYNLKGFYAGNHTLTCPSLRKLDVTLCVKLNLYRTLSTIKSILKL* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1777 1247 SUPERFAMILY L domain-like 903 1233 - -
Amo09g1777 1247 PANTHER RPP4C3 1023 1104 - -
Amo09g1777 1247 PANTHER RPP4C3 23 1014 - -
Amo09g1777 1247 Gene3D - 138 303 IPR027417 -
Amo09g1777 1247 PANTHER - 23 1014 - -
Amo09g1777 1247 Coils Coil 68 88 - -
Amo09g1777 1247 Pfam NB-ARC domain 161 389 IPR002182 GO:0043531
Amo09g1777 1247 PANTHER - 1023 1104 - -
Amo09g1777 1247 PANTHER - 1131 1232 - -
Amo09g1777 1247 PRINTS Disease resistance protein signature 835 851 - -
Amo09g1777 1247 PRINTS Disease resistance protein signature 247 261 - -
Amo09g1777 1247 PRINTS Disease resistance protein signature 174 189 - -
Amo09g1777 1247 PRINTS Disease resistance protein signature 339 353 - -
Amo09g1777 1247 Gene3D Ribonuclease Inhibitor 1014 1247 IPR032675 -
Amo09g1777 1247 PANTHER RPP4C3 1131 1232 - -
Amo09g1777 1247 Gene3D Ribonuclease Inhibitor 709 1013 IPR032675 -
Amo09g1777 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 403 IPR027417 -
Amo09g1777 1247 SUPERFAMILY L domain-like 485 853 - -
Amo09g1777 1247 Gene3D Ribonuclease Inhibitor 478 696 IPR032675 -
Amo09g1777 1247 Gene3D - 305 392 IPR042197 -
Amo09g1777 1247 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1777 Amo-Chr9 72798877 72804088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1777 172 478 WRKY Transcription Factor Family AT5G45050 25.312 2.70e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1777 - - aip:107625541 1570.44