Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1762 ACTTTTGGTTACAATTGCTTTATTAATCATCATGAGCTTGAACCTTATGGTTCTATTATTGTTAGTGTCATTGAACATAAAGCTTTATTGGTAATAAGGGATTCTTTAAGTTCTTCTGCCAATTTGCATGAGAATTGGACAGATTCTCCTTGTATAGGAAATCAAAGTAGATGGAAAGGTATCATTTGTTCAAATTGGCATGTTGTTCAAATAATCCTTGAAGATTTCAATCTTAGGGGTTCATTGCCTTCTACCTGTTTGCAAAAAGTACCTTTCTTGAAACACCTTAACTTGGGAAACAATTCAGTTCTTGGTTTGCTTCCTAATCTCACAAACTTGGTATTTTTGGAACAAGTTTTGCTTTCATATAATCATTTCTCAGGTCCAATCCCTTTGGAATATGCTCATGGATTGCCTAACCTGAAAGTGTTGGAGCTGCAAGAGAATTACTTGGATGGTCAAATTCCATCCTTTGATCAACCAGCACTGACGAGTTTCAATGTATCCTCCTTTGATAATAATTCTGATCTATGTGGGAAGTCATTGGATAAGTTGTGTCCTTCTTCACCTCCTGCTGGCCCATCTTCTGCGCCATATCCTTCTGTTATTCCTCAAGGCTCTGCAGCAGCAAAACACGAGCATATCGACCAAGTCAGAGTGATCGTTTTGATTGTTGCTTCAGGAGCAATTTTGCTTCTTGTGATAATATCTATTTTCTTGGTTTACAATAAAGGAGTGCCTGAAAAAGAAGCAAGAAATGGTGCATCAGGGTATACTTTTGGAGCTTGGGCAAGAAACATAGTTTCTGAAAATGAAGATTATGAAAGATTAGGCAGAATGGAATATTTCAGCAAGGAATTGGCAGCTTTTGACATAGATGATTTATTAAGGGCATCAGCAGAAATGCTAGGGAAAGGTAATTTAGGCATTACATACAAAGCTACCCTTGAAACTGGCATTGTTCTTGCGGTAAAGAGACTTAGTCACATGAATGAGTTAAGCAGAAAGGAATTTACAAAGCAGATGCAAGTTCTTGGGGAGTTGAAACATGAGAATTTGGTAGAAATTATCTCATTTTATCACTCAGAGGAGCAAAAGTTGATCATACATGAGTTTATCTCAAATGGCAGCTTATTTGACCTCCTACATGGT 1152 0.3724 TFGYNCFINHHELEPYGSIIVSVIEHKALLVIRDSLSSSANLHENWTDSPCIGNQSRWKGIICSNWHVVQIILEDFNLRGSLPSTCLQKVPFLKHLNLGNNSVLGLLPNLTNLVFLEQVLLSYNHFSGPIPLEYAHGLPNLKVLELQENYLDGQIPSFDQPALTSFNVSSFDNNSDLCGKSLDKLCPSSPPAGPSSAPYPSVIPQGSAAAKHEHIDQVRVIVLIVASGAILLLVIISIFLVYNKGVPEKEARNGASGYTFGAWARNIVSENEDYERLGRMEYFSKELAAFDIDDLLRASAEMLGKGNLGITYKATLETGIVLAVKRLSHMNELSRKEFTKQMQVLGELKHENLVEIISFYHSEEQKLIIHEFISNGSLFDLLHG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1762 384 Gene3D Phosphorylase Kinase; domain 1 263 372 - -
Amo09g1762 384 Pfam Protein kinase domain 301 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1762 384 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Amo09g1762 384 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 383 - -
Amo09g1762 384 SUPERFAMILY Protein kinase-like (PK-like) 301 383 IPR011009 -
Amo09g1762 384 Gene3D Ribonuclease Inhibitor 109 191 IPR032675 -
Amo09g1762 384 Gene3D Ribonuclease Inhibitor 20 108 IPR032675 -
Amo09g1762 384 SUPERFAMILY L domain-like 25 171 - -
Amo09g1762 384 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 20 383 - -
Amo09g1762 384 ProSiteProfiles Protein kinase domain profile. 297 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1762 Amo-Chr9 71904002 71908875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1762 18 384 Receptor kinase-like Gene Family AT2G36570 30.524 1.26e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo09g1762 Pkinase 4.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1762 - - gmx:100788386 389.037