Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1756 ATGGACTTTGTTCATAGTGTGGATGGGCCATGTGATATTGTCCCCAGAGTTCTAGCTTGCTTCAATAATAACCTCCTTCGTGGTGAGCCGCTCAAACTTGTTCATGGTGAAAGATCACAGCTAACCTTTCTCTACATCAAGGATGCTATCGAGGTTGTTTTGTTAATGATTAGAAAATGGACAGATATTCAATGTGGGAAACCCAGACATGAAGTATCTGTGAAGGAACTAGTTGAGCTTATGATACAGGTGTTTTCGCATGCTACAACATCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAGTATTGAGTGGTGGATGAGCAAGAGACGGCAGCCACAAGGATTTAGGCAGCGTGTGCGCAACTACGAAAGGTAG 378 0.4312 MDFVHSVDGPCDIVPRVLACFNNNLLRGEPLKLVHGERSQLTFLYIKDAIEVVLLMIRKWTDIQCGKPRHEVSVKELVELMIQVFSHATTSKKQAMQLKMRSIEWWMSKRRQPQGFRQRVRNYER* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1756 125 Gene3D - 5 125 - -
Amo09g1756 125 Pfam NAD dependent epimerase/dehydratase family 14 61 IPR001509 -
Amo09g1756 125 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 91 IPR036291 -
Amo09g1756 125 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 93 - -
Amo09g1756 125 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1756 Amo-Chr9 71550978 71551722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1756 82 125 Ion Channels AT5G54250 81.818 2.56e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1756 K12449 - gmx:100790039 108.612