Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1738 ATGGATCATAATAATGGTTTGGTTTTGAAGTGTAACGGTTCTACGAAATGCTTCACTGACCAAGACCCATTTTTTGATCCATTGGAGGAACAAGTGTTATCTGAATCAGCATTGACCTCATTGTGCATAATGAACAATTCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGCTGATTTTCCATCAAGTTCTGAGGTATCCAAGAATTTGTTGGAGCGAATTGATGTGTCAGAAGAGTTCACTTCAGTGGACGAAATTTGCCAATGGTTTGATCCTTCACAAGAGGATAATAACTCAAACACCTTTCCTGAACCAATGCAATGTGATGCTACTTCCTTTTCTTGGAAATCAATTATGGATAGCTATGAGAATTGTCTATTGGGAAGCATGGAACCCGAGTTGAATTTGATCGCACCAGTGGCGATGAGTTCTGCTGATGATACTGCCAGCTTTGAGTGCCTATCAGAGTTTGATTTTGATGCGCTAATAACAGGCTTATTCTCAGATTCATCAATTGAAGAGCTTTTGAATTATGAAGAAGCAAATTGCAACAACCCTTTGAATAATGGTTCTAGTGCTGTTTTGGAGTTATCATCAGAAAATAATAAAATGGAGATGATGGAGAACATTTCAAATCCAATGAACTTCACAAAAAATCTTGCTTGGTTTGAGGCTAGAAATAACTTGACCCAGCCGGTTCCGGATTTGGACACGGCAAACAAAATCAAGAGAAAGGAAGAGGAGCCGAAAAAACCTAGCAAGAAGAAGGACAAGACAGGGGAGTGTAGTCGGCCACGGCCAAAAGATCGCCAGAGGATTCAAGACTGCATTCAACAATTGAGAACAATCATCCCTGGCAAGCATGTTAAAGAGTGTAGCATTGATAATTTGTTAGAGTGCTCGATCAGATACATGAGTTTCTTGTCAAGCACTGCACATTATGCAAACAAGCTACAAGAACCAGATAAGCCTAAGCTTATTGAGCAGGCAAATGGCGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAACATTCTGGAACATGGTCATTTGAAGAGCCACATCAAACATTATCATGCCCGATTATAGTTGAGGACATGGCTCATCCTGGCCAAATGCTTATAGAGTTGCTTTGTGAGGAGGAAGGGTTCTCTCTTGAGTTGCTTGACACAATTAAGGGTCTTGGTTTGAATATCCTGAAAGCAAAGATGGAAACAAGGAACAAAAAACTATGGGCACGCTTTATTGTTGAGGCCAATAGACATGTGACAAAGATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAACAGAAAAACTCCTCAAGAACTGGAATGGATTCATCAACTAATAATAACAAAAATTGCAATGTAATGAATGATGGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACATTTTTATGTCCATGACAGAGGCACTAAGCTTCAGTGGTTGA 1485 0.396 MDHNNGLVLKCNGSTKCFTDQDPFFDPLEEQVLSESALTSLCIMNNSMENQHSNQVIMAEADFPSSSEVSKNLLERIDVSEEFTSVDEICQWFDPSQEDNNSNTFPEPMQCDATSFSWKSIMDSYENCLLGSMEPELNLIAPVAMSSADDTASFECLSEFDFDALITGLFSDSSIEELLNYEEANCNNPLNNGSSAVLELSSENNKMEMMENISNPMNFTKNLAWFEARNNLTQPVPDLDTANKIKRKEEEPKKPSKKKDKTGECSRPRPKDRQRIQDCIQQLRTIIPGKHVKECSIDNLLECSIRYMSFLSSTAHYANKLQEPDKPKLIEQANGVVLQESSVEGSKHSGTWSFEEPHQTLSCPIIVEDMAHPGQMLIELLCEEEGFSLELLDTIKGLGLNILKAKMETRNKKLWARFIVEANRHVTKIDVFWSLLHLVEQKNSSRTGMDSSTNNNKNCNVMNDGSVSRLDKQQQEKESCNIFMSMTEALSFSG* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1738 494 MobiDBLite consensus disorder prediction 236 276 - -
Amo09g1738 494 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 311 IPR011598 GO:0046983
Amo09g1738 494 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 52 476 - -
Amo09g1738 494 MobiDBLite consensus disorder prediction 241 276 - -
Amo09g1738 494 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 52 476 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1738 Amo-Chr9 69703388 69705630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1738 239 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 40.566 1.12e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1738 - - ahf:112709220 965.296