Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1737 ATGTCGAGCTCCTCTATTTTGTCTCTTCTTCCGGATCTACTCGCCATCTCGTTCTATGTGTGCGTTGTTCAAATCTGCTATAGATGCGTGAGCATCCTACTTCTGTCGTCGCCTCCAGTCCATGTCATCGCTAACCTTTCACTGTCACCATCCATCACTGCAATTTTCCAAAGGATGAAGAACTATACCATATATGCAGTGTCAATCACCATTCGTATTGTGTTTGATTTCATGTTTAGTGCATTGATTTGGAAGTTTGATTTTGCACCCTTTATGGTGTTGATCATGGCCATACTAAATGATGGTACCATTATGAGAATATCCAAGGATAGAGTGAAACCACCCCCAACAACCTGA 357 0.4202 MSSSSILSLLPDLLAISFYVCVVQICYRCVSILLLSSPPVHVIANLSLSPSITAIFQRMKNYTIYAVSITIRIVFDFMFSALIWKFDFAPFMVLIMAILNDGTIMRISKDRVKPPPTT* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1737 118 Gene3D - 53 118 - -
Amo09g1737 118 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 113 IPR023298 -
Amo09g1737 118 PANTHER CALCIUM-TRANSPORTING ATPASE 28 117 - -
Amo09g1737 118 PANTHER ATPASE 5, PLASMA MEMBRANE-TYPE 28 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1737 Amo-Chr9 69595823 69598148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1737 28 117 Primary Pumps ATPases AT5G57350 71.111 4.48e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1737 K01535 - psom:113299271 122.864