Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1729 ATGGAGTGGTGGGTGTCAATACCAAAGGTGGAGTTGCATGCTCATCTCAATGGATCCATTAGAGACTCCACACTCCTCATCCATAATAAGGGACAAAAAGGCATATCTACGACTTCTAGTGCATCTGGCAAAGCAGTGTCTAGTGGCATGTCCAGTGATGAAAAAAATTCAGTCTTGATTGCAATGCGGAGGGGTGATAACTTAAGGGCCGAGGTTCTAAATTTATTGCATAAGCATATATCTCTTGATCATATGATTATATGCTTTTTTTACCCTTTCATATATCATGGGATGGCTGAACTGCATATCAGGCACAGAGAAATGTGCCTTGATGTTGATAACATGTCTTATGAGGAATTATTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCAAGGATGTCATTATAAAGTCGATGAAACAGCAAATATACATGTCTGTTATGGTGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGGTAAGAGTTATGGTCTCAGCTAATTAA 525 0.4038 MEWWVSIPKVELHAHLNGSIRDSTLLIHNKGQKGISTTSSASGKAVSSGMSSDEKNSVLIAMRRGDNLRAEVLNLLHKHISLDHMIICFFYPFIYHGMAELHIRHREMCLDVDNMSYEELLALEERIGDVSTGLSKDVIIKSMKQQIYMSVMVESSTDLEPCCICQVRVMVSAN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1729 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 53 167 IPR045191 GO:0061630
Amo09g1729 174 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 53 167 - -
Amo09g1729 174 Gene3D - 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1729 Amo-Chr9 69250995 69253120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1729 54 166 C3H Transcription Factor Family AT2G15530 57.759 7.51e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1729 - K19041 ahf:112747303 208.379