Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1720 ATGACCTCTTCTTCTTCCTATTATTCTAGAAGCTTCTCGGCGAACCCGCGGGACTACAAGCTTCTAGAAGAAGTCGGATTCGGCGCTAGCGCAACCGTCTACCACGCCGTTCACATCCCCTCGAACGAGCAAGTCGCCGTGAAGGTCCTGGATCTGGACCGATGCAACAGCAACTTCGACGACATACGGCGAGAGGCTCAGACCATGAGCCTCATCGATCACCCCAACGTCGTCCGCGCCSTCTGCTCCTTCGTCGTCGACCGTAGTCTCTGGGTGGTTATGCCGTTTATGGACCAAGGCTCCTGCCTCCACCTCATGAAGGTCGCATACCCCGACGGCTTCGAAGAAGATGCCATTGGATCCGTACTCAAGGAGACACTCAAGGCTCTTGACTACCTCCACCGCCATGGCCACATCCACCGCGATGTTAAGGCTGGGAACATACTTTTGGATTCCAATGGCGATATCAAACTTGCTGATTTCGGTGTTTCTGCTTGCATGTTTGATGCCGGCGATAGGCAGCGTTCCAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCGGAGGTGCTGCAGCCTGGAACTGGTTATAATTTCAAGGCTGATATATGGTCTTTTGGGATTACGGCTCTTGAGCTGGCTCATGGTCATGCACCTTTCTCGAAATATCCTCCCATGAAGGTGCTTCTAATGACCATACAGAATGCCCCTCCGGGCCTTGATTATGATCGGGATAGGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTAAAAGATCCGACAAAGAGACCGACGGTGGAGAAGTTACTGAAACATTCTTTCTTCAAGCAAGCCAAGCCTCCTGAGCTTTCTGTAAAGAAATTGTTTGCCGACTTACCTCCACTTTGGAATCGCGTAAAAGCTCTGCAGCTTAAAGATGCTGCTCAACTAGCACTAAAGAGAATGCCTTCTGCAGAGCAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAGGCTTCATCGGTAGAGAACAATGATGGTTTTGCCGAGATGAGGGAAGAAGATGAACCCAAAAGTGTTAGCGAGTACAAGGATACAACTGATTTTCAGCTTAATGTGGACAAGAATTCAGAAAACTCACAAGAAGATGAGTTTGGACTAGAAGTAGGTGTTTATCATCACACACCACAAAGTGAGAAGAGAAATGGATTGGTTGCCGAGGCATCACCTTCTACCCTAGATAAGGATACAGGATTGAGCAAGACCAAAATTCAATCAACGAGGATTCGTAAAACCCAGAGTGGGCCACTGGTGCCAGGCACAGTTCTTGGTCATTCTTTACCTGATAGAGGGTCTACATTTGAAAGGTTAGAGAGTGAAAATCAGTCATCAGGTGACAAAAGTAGTCGTGATTCCCGACGAGCTCCCAACTTTAGTGGTCCATTGATGCTTCCAAACAGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATACAGAGATACTTTGGATGATAAATCTAAGACTAATCTAGTGCAAATCAAAGGACGATTCTCAGTGACTAGAGAGAATTTAGATCTGGTGAAGGATATCCCCGTAAGTTCAGTTTCACGCAGATCTTCACAGGGATCACCGCTGAGGAAATCTGCCAGTGTTGGTGATTGGATGCCGGATGCCAAACAAATGCCAGTTGGTCAGTCATCAAAAGATTCTGCGAATATCAATGTTTCTGCCTCACCTCTTATACCTCACCTTCAAAACCTTTTTCATCAGACATCTATTCAACAGGATCTCATAATGAATCTTTTGAATAGCTTGCAACCTGCCGAGGCAGTTGATGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCACTCCAGAGAACAATGGGAATATCGAAACAACAGCCTCGGAGAGGGAGCAACTGCTACTGCTAAAAGTTTCGGAACTTCAAGCACGGATGATGAATTTGACCGACGAATTGAATTCTGAAAGGTTAAAATACCAGCAGTTGCAACAACAGTTAAATGCTCTTTACAGTCAAGAACAAAATGGAAAAAGAGGAGTTGCATGA 2124 0.459 MTSSSSYYSRSFSANPRDYKLLEEVGFGASATVYHAVHIPSNEQVAVKVLDLDRCNSNFDDIRREAQTMSLIDHPNVVRAXCSFVVDRSLWVVMPFMDQGSCLHLMKVAYPDGFEEDAIGSVLKETLKALDYLHRHGHIHRDVKAGNILLDSNGDIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDLDDLKAQASSVENNDGFAEMREEDEPKSVSEYKDTTDFQLNVDKNSENSQEDEFGLEVGVYHHTPQSEKRNGLVAEASPSTLDKDTGLSKTKIQSTRIRKTQSGPLVPGTVLGHSLPDRGSTFERLESENQSSGDKSSRDSRRAPNFSGPLMLPNRASANSLSAPIKSSGGYRDTLDDKSKTNLVQIKGRFSVTRENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMPDAKQMPVGQSSKDSANINVSASPLIPHLQNLFHQTSIQQDLIMNLLNSLQPAEAVDASQNGKLPPLPRTPENNGNIETTASEREQLLLLKVSELQARMMNLTDELNSERLKYQQLQQQLNALYSQEQNGKRGVA* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1720 707 MobiDBLite consensus disorder prediction 553 590 - -
Amo09g1720 707 MobiDBLite consensus disorder prediction 496 511 - -
Amo09g1720 707 ProSiteProfiles Protein kinase domain profile. 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1720 707 Pfam Protein kinase domain 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1720 707 Gene3D Phosphorylase Kinase; domain 1 8 96 - -
Amo09g1720 707 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 701 - -
Amo09g1720 707 Gene3D Transferase(Phosphotransferase) domain 1 100 329 - -
Amo09g1720 707 MobiDBLite consensus disorder prediction 425 446 - -
Amo09g1720 707 SUPERFAMILY Protein kinase-like (PK-like) 17 331 IPR011009 -
Amo09g1720 707 MobiDBLite consensus disorder prediction 355 511 - -
Amo09g1720 707 Coils Coil 664 698 - -
Amo09g1720 707 MobiDBLite consensus disorder prediction 359 394 - -
Amo09g1720 707 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 701 - -
Amo09g1720 707 MobiDBLite consensus disorder prediction 629 653 - -
Amo09g1720 707 MobiDBLite consensus disorder prediction 463 485 - -
Amo09g1720 707 CDD STKc_OSR1_SPAK 18 280 - -
Amo09g1720 707 SMART serkin_6 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1720 707 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1720 Amo-Chr9 68470953 68477394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1720 10 700 MAP Kinase Kinase Kinase Kinase AT4G24100 64.907 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Amo09g1720 Pkinase 1.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1720 - - gmx:100783699 1117.06