Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1719 TCAGAAGATATCCTTGAAGCCACTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAAAATTTTGCGGAGGAAATTGGCAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCCAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGAAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAACCTAGATTGGAAATAAGAACTGGATGTGAAGCCCGAATGGATTATTTTCAAAGGTGTGTTGCACACTTGTGCTTTAAAGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTGTTTCGTCCATTTCTCTCTAGAGGTGGATCAATGCGGGTGCTAAACATAGATAATAACGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCGTTGATTTTCGTCAAGAAGATATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTACGAACATATTGTGAAAGTTCTGGTTGACAGAGACATTTGTGAGATTTTTCGGTCATTGGTATTGAATAGATGGACAAAAAAGGTTACATCGGCACTCAATGATCCAAGTGGGTTCACCAGGAATGCTGTTGTTATTAGTCGTCAAAGTGCCTTGATGGAATTTTCTAAACAATTAACTGTTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACCTAATTAAGGAATTTAGCAATTCGTATGTGCATCAAAGCGGTGTAGGCTCAGGACAACCATCTAGGAAAAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATTGAAGATGAAGCTAATGGTTCGGATGATGGCGACGTATATCCAGAACCGACAGCTGAGTTAGATAGTGATAATTAG 1113 0.3908 SEDILEATYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRKGFREEKYYTMEKRKKEPRLEIRTGCEARMDYFQRCVAHLCFKEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLLFRPFLSRGGSMRVLNIDNNDDCIKYIVCKHGRPDFMWTVDFRQEDMIFMCTCLRMESFGIPYEHIVKVLVDRDICEIFRSLVLNRWTKKVTSALNDPSGFTRNAVVISRQSALMEFSKQLTVVAAKVPERYEETRDLIKEFSNSYVHQSGVGSGQPSRKKRQRCSVCQMEGHKKTTCPWQKDIDNNVIEDEANGSDDGDVYPEPTAELDSDN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1719 370 Pfam FAR1 DNA-binding domain 43 124 IPR004330 -
Amo09g1719 370 MobiDBLite consensus disorder prediction 336 370 - -
Amo09g1719 370 PANTHER OS01G0607050 PROTEIN 109 299 - -
Amo09g1719 370 PANTHER OS01G0607050 PROTEIN 28 111 - -
Amo09g1719 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 109 299 IPR031052 GO:0006355
Amo09g1719 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 111 IPR031052 GO:0006355
Amo09g1719 370 Coils Coil 366 370 - -
Amo09g1719 370 ProSiteProfiles Zinc finger SWIM-type profile. 193 231 IPR007527 GO:0008270
Amo09g1719 370 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1719 Amo-Chr9 67724694 67726874 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1719 FAR1 1.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1719 - - adu:107457867 454.521