Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1690 TTCAGAGAGGAGAGACAGCTCGCATCGCCATCGCCACTGCCGTCGCCATTGCGGTTTATCGCCTCTCCAGATCTGGTTGCAACGCCCAAGCCTCTGAGGATGTTTCGTTACGACCTCTTCGACGAGACGCAGAACAAGCTCGATTACATCCTCTCTCTCACTGTCGAGAACTTGCTCGGGCGCCGCCTCCATACTCTCGTCTTCAAGTCTGGTATAGCCAAGTCCATTCACCAGCGCTACATTAGGAGGTTGATTAAGCTGGAGGCTTTGGAGAAAGTCATCCATGAAAGAATAGATGCTCCCAGAGCACCTAGGCAGTGGTGGTTTGGCAAGGGGACTGACTTGACTCCTTCTTACATTTTCGAGGATGATGTTAAACACTTCCATTCGTTGCAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGATTGTAAGTATAGATGGAAACATTATGCTTAGGCTCAACAGAGCAATGGGTTGCTTCTTCGCGATGTTCTGGTATCTCGAAACAGCTATTCCTCTGTGTTTCGAGCTCAAGGCCAAGTTTCTTAAAGCCTGTGGTACTTTACCAGGGACACCTATTGAAATTTGGAAAACATTTGAGAAACTGAAAGTGTCACCCTCTCCCAATAAACATTCTGAGCCATCAAAGTTTCATTCTTGGCTTCCGAATGAGTCTGTTGAGAAACTTCAACTGGATTTTCATTCAGTTAACCCCCAAACACCCTTGAAAAATTTTCAAGAATTGGGAGATAGTACAGACTCTTTTGAGCACACACCAGACAGGCATATACGAGCGAGTTGCAACTTAAAGTGGATCACTTGCTGGAAAAGAATGCAAGACTCAAGAGACAGCAACAAAAGGCATGCATCTTCATTTATATACATAAATACACACATTTTAGTTACTAGTGATTTTGTTTGTTTATGTTTATGTTTCAATATTTCATCAAGTGAACCTTATCTTCATTTCGTTCTTGCAAAATGGGATCTGGTTTAA 1014 0.4329 FREERQLASPSPLPSPLRFIASPDLVATPKPLRMFRYDLFDETQNKLDYILSLTVENLLGRRLHTLVFKSGIAKSIHQRYIRRLIKLEALEKVIHERIDAPRAPRQWWFGKGTDLTPSYIFEDDVKHFHSLQHTYNELVEYKLVLEKIVSIDGNIMLRLNRAMGCFFAMFWYLETAIPLCFELKAKFLKACGTLPGTPIEIWKTFEKLKVSPSPNKHSEPSKFHSWLPNESVEKLQLDFHSVNPQTPLKNFQELGDSTDSFEHTPDRHIRASCNLKWITCWKRMQDSRDSNKRHASSFIYINTHILVTSDFVCLCLCFNISSSEPYLHFVLAKWDLV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1690 337 Gene3D Coproporphyrinogen III oxidase, aerobic 73 151 IPR036406 GO:0004109|GO:0006779
Amo09g1690 337 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 184 270 IPR039300 GO:0007142
Amo09g1690 337 SUPERFAMILY Coproporphyrinogen III oxidase 99 135 IPR036406 GO:0004109|GO:0006779
Amo09g1690 337 PANTHER - 184 270 - -
Amo09g1690 337 Pfam Coproporphyrinogen III oxidase 102 134 IPR001260 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1690 Amo-Chr9 66649697 66652632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1690 33 82 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 68.421 4.18e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1690 - - adu:107465882 195.667