Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1647 ATGGAGGTTGCGGTCTTGAAGATTAGAGTCGTGGTTGTTGTAGCTCTCCACGATCGTTATCATTTCAGCCCTGGAAGCACCATCTGTTCCACAGTCGCCGTTCGTCTCTACGTCTCGCATCTCTGCTCCAGCATCGCCGGTGTCAGTTTGATTCCACAGACAAGCATTTCTATTGCTCTGGAAAGTTATAGAGGATTGAAAAGCCAGTTGCTTTTTATCAGAGAGTTGGCAAATGATAAGGAAGAAACATTATCTTTCGTGCATACAGAGACGGATGATGTTTTGCTTCCAGAGATAGTAGTTGCTAGATATGGGGTCGAGCTGAAACATGAAATTGTCCTGATTGATCTTTGTGACAACTGTATCAAGCTTAAATTAAAAAAATGGGAAAACAAAATCTGGATACCTTCCGGTGAGGTAGACAAGTTATTTTCTTTCTATAAGTTCAAGAGTGTGGTGAAAATCGGTCTAATGCATGTCACAAGTGTCATATTTTTTGTGGCTCCTGTGGATAGGCGAAGTAAACCAATTTATATGGATTTTTATGCTTTTCACTATGTTAAAGATATTGTTGATATATCTTTACTAAAACTAATTCAAGATGAGTTGGGATTGAACTACTTTGATGGACTGGATGATGTTTCATATGGTATAAAAGATAATGAGATGCATGGAAATATGAAAAGTTCTGGTGTGCAAAGGATTCAAAAGAACACTTCCAATGAAACTACTATCAAGAAGAGATGTGTTGCTGAACATCATAGCAAGAGGTTGACGGAGTATGATATGAAGGCTGATCGATTTTATATTTGCTGTGAGTTTGCTAGATTATTGCTTAAGAGTGGTGGATTGGAACAATGGAAATTTACTGTTAAGGGCTCAAAGATTACTAAAACCTTTGCAATGCATGTCTTGAAAAGTAAGGGCAGGAATCGAGAGTACAAAATTGGACCCAAATGGAAAGATTTTGTCAAGATGCATAAACTTAGGCCTGGATATTTATGTGTATTTAGGAGTGATTCGAACAAAAATCATTTGGTTCAGGTTTCTGTGGTTAGAAACTAA 1065 0.3775 MEVAVLKIRVVVVVALHDRYHFSPGSTICSTVAVRLYVSHLCSSIAGVSLIPQTSISIALESYRGLKSQLLFIRELANDKEETLSFVHTETDDVLLPEIVVARYGVELKHEIVLIDLCDNCIKLKLKKWENKIWIPSGEVDKLFSFYKFKSVVKIGLMHVTSVIFFVAPVDRRSKPIYMDFYAFHYVKDIVDISLLKLIQDELGLNYFDGLDDVSYGIKDNEMHGNMKSSGVQRIQKNTSNETTIKKRCVAEHHSKRLTEYDMKADRFYICCEFARLLLKSGGLEQWKFTVKGSKITKTFAMHVLKSKGRNREYKIGPKWKDFVKMHKLRPGYLCVFRSDSNKNHLVQVSVVRN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1647 354 Pfam B3 DNA binding domain 258 347 IPR003340 GO:0003677
Amo09g1647 354 Gene3D - 231 354 IPR015300 -
Amo09g1647 354 SUPERFAMILY DNA-binding pseudobarrel domain 255 351 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1647 Amo-Chr9 64937972 64943411 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo09g1647 B3 3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1647 - - ahf:112797376 367.466