Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1639 ATGGCCTCTCAGTCTTGCGCAGCCGCTCTCTTAGGCGGTTTGGCCAACGTCAACACAACGGCCGCAAACTTCATCTGCGGCCAGCTGGACGCTATTAACCAGAAGCTCACCGACACCACCTACGCCGTCGACAACACCTACCTCCTCTTCTCTGCGTACCTAGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTTACCAATGTTCTTGACGCAGCCGCCGGCGGCCTCTCCTACTACCTCTTCGGCTATGCCTTTGCCTTCGGGGGCCCCTCCAACGGCTTCATCGGTCGCCACTCCTTCGGTCTCAGCGACTTCCCCTCTCCCTCCGCCGACTACAGCTTCTTTCTCTACCAGTGGGCCTTCGCCATCGCCGCAGCCGGCATAACTAGCGGCTCCATCGCCGAGAGAACGCAGTTCGTCGCTTACCTTATATACTCCTCGTTCCTAACCGGCTTCGTCTACCCTATCGTCTCTCATTGGTTTTGGTCGTCTGATGGGTGGGCCAGCCCGACCAGAACCAATAGAAGCCTCCTCTTTGGATCTGGCGTAATTGATTTTGCCGGATCTGGAGTCGTCCACATGGTCGGCGGAGTTGCCGGCCTATGGGGAGCCTTGATTGAAGGACCACGCATAGGTCGCTTTGACAGAAGTGGCCGTTCGGTGGCCCTTCGAGGCCACAGCGCTTCCCTAGTTGTGCTAGGTTCGTTTATGTTATGGTTCGGTTGGTACGGTTTCAATCCAGGCTCCTTTCTAACCATTGCGAAAAGCTACGGTAAAAGTAGCGTGTATTATGGACAATGGAGCGCGATAGGGAGGACAGCTGTCACTACTACATTGGCTGGTTGCACTGCGGCCCTAACTACTTTGTTCAGTAAACGGTTATTGGTTGGACACTGGAACGTCATCGATGTGTGTAACGGTTTGCTTGCTGGTTTCGCTGCCATAACGTCCGGGTGCTCTGTCGTTGAGCCATGGGCGGCGATTGTGTGCGGCTTTGTTGCGGCGTGGGTACTCATTGGGCTCAACATGTTGGCGGCAAAGGTGAAGTTTGATGATCCATTGGAGGCGACGCAGCTCCACGGAGGGTGTGGTGCATGGGGAGTGCTATTCACGGGGTTATTTGCAACTAAGAAATACGTGGCAGAGGTGTACGGATCGGAGAGGCCTTACGGGCTGTTGATGGGCGGCGGAGGGAAGCTGCTGGCTGCGCAGTTGATCGAAATTCTAGTAGTTAGCGGGTGGGTGACGGCAACGATGCTGCCGCTGTTTTACGGGCTTCAAAAGATGAACCTGTTGAGGATATCGAGGGAAGATGAGACGGCGGGTATGGATTTGACGAGGCACGGTGGGTTTGCTTATGCGTATCATGATGAAGATGATGGGTTTGCAAAGCCCGCCATGTATATGATGGGCAGGATTGAGCCTTCTCCTGAAGCCAATCCACTGTAA 1494 0.5522 MASQSCAAALLGGLANVNTTAANFICGQLDAINQKLTDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGGPSNGFIGRHSFGLSDFPSPSADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASPTRTNRSLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFMLWFGWYGFNPGSFLTIAKSYGKSSVYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLAGFAAITSGCSVVEPWAAIVCGFVAAWVLIGLNMLAAKVKFDDPLEATQLHGGCGAWGVLFTGLFATKKYVAEVYGSERPYGLLMGGGGKLLAAQLIEILVVSGWVTATMLPLFYGLQKMNLLRISREDETAGMDLTRHGGFAYAYHDEDDGFAKPAMYMMGRIEPSPEANPL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1639 497 Gene3D Ammonium transporter AmtB like domains 21 483 IPR029020 -
Amo09g1639 497 SUPERFAMILY Ammonium transporter 41 449 - -
Amo09g1639 497 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo09g1639 497 PANTHER AMMONIUM TRANSPORTER 6 491 - -
Amo09g1639 497 Pfam Ammonium Transporter Family 47 468 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo09g1639 497 PANTHER AMMONIUM TRANSPORTER 6 491 - -
Amo09g1639 497 TIGRFAM amt: ammonium transporter 44 468 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1639 Amo-Chr9 64815608 64819403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1639 23 495 Inorganic Solute Cotransporters AT1G64780 80.672 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1639 K03320 K07573 gmx:100797209 812.372