Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1600 ATGCTGCCTGTTTTGGTCCCTAGTTCTCTGGCTGGAAGTGTATTTTCTATTRCGGTCACTGATTCTCTGGRTGGAAATTCATTTTCTGTTTTGATTACTGCTCTGTTTTGGATCGCTGTTGGTTGCAGCAGATTAGAGCGCCTCAGCTTGAAGTGGTGCTTTGAGATTTCTGATCTTGGCGTTGACCTTCTTTGCAAGAAGTGCTTCTATTTGAAAGTTCTCGATGTCTCGTATCTCAAGATGATCCATTTTGGTTTTGACTTTTCAGTTTTCACACTTSGTCCTTTGTRTTTGTTCAAAACAGTTATCTCAGTTCCACATTACAGTACCATGTGCAGATTGGTGAATGAAAGGGACAGAGAGATTGAGAAACAAAGCTGGACACTGGAAGCATTGGAAGCTGGGAAGAGTTACTATGGAAGGTTGCTGAATTACAAGAAGGATGGGATGCCCTTCTGGAACCTACTTACAATTTCACCCATCAAGGACGAAGGTGGCAAAGTCATCGAATTCATGGGGTAA 522 0.4195 MLPVLVPSSLAGSVFSIXVTDSLXGNSFSVLITALFWIAVGCSRLERLSLKWCFEISDLGVDLLCKKCFYLKVLDVSYLKMIHFGFDFSVFTLXPLXLFKTVISVPHYSTMCRLVNERDREIEKQSWTLEALEAGKSYYGRLLNYKKDGMPFWNLLTISPIKDEGGKVIEFMG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1600 173 SUPERFAMILY RNI-like 24 79 - -
Amo09g1600 173 ProSiteProfiles PAC domain profile. 136 173 IPR000700 -
Amo09g1600 173 PANTHER PHOTOTROPIN-1 112 173 - -
Amo09g1600 173 SMART LRR_CC_2 42 67 IPR006553 -
Amo09g1600 173 PANTHER FLIPPASE KINASE 1-RELATED 112 173 - -
Amo09g1600 173 Gene3D PAS domain 109 173 - -
Amo09g1600 173 Gene3D Ribonuclease Inhibitor 27 90 IPR032675 -
Amo09g1600 173 SUPERFAMILY PYP-like sensor domain (PAS domain) 118 173 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1600 Amo-Chr9 61030285 61031775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1600 112 173 AGC Kinase Gene Family AT3G45780 53.226 5.22e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1600 K20715 - ahf:114925890 183.341