Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1590 ATGCTTTTCTGCTCGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAACAAATGAAAAATTTCAGAGACGAAGCTATTGGATGCTTGAACCGATTCTGGCTGAAGTTGAAAACTTTGCAAGATTCTGGTTGAAGTTGAAAACCTTGCTGCTGATTGCTTTGGCATCCTACCTCATTAAACTTCATGCAGAATGTAGTTAA 213 0.4085 MLFCSVGSVDVLHCYYAHGETNEKFQRRSYWMLEPILAEVENFARFWLKLKTLLLIALASYLIKLHAECS* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1590 70 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 6 39 - -
Amo09g1590 70 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 39 - -
Amo09g1590 70 ProSiteProfiles CG-1 DNA-binding domain profile. 1 54 IPR005559 GO:0003677
Amo09g1590 70 Pfam CG-1 domain 6 35 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1590 Amo-Chr9 60567172 60568642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1590 6 40 CAMTA Transcription Factor Family AT5G64220 74.286 1.10e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1590 K21596 - aip:110270662 71.2478