Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1564 ATGTTCCAAGGTGGCATAGAGAATAAATACAAGTACTATTTGTTTAGAATAAATAAAAGTGCTGGCAGGTTCAGTGAAGACGAGGTTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCCATTTCTGGCTAAAGATTTTAATTTTCTTTTTCACTTTGCTGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCAGCACCTCGCTTAAAAATTTATGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCAACCCAAATCAACTGTTAGAACACCAGCTTATATAGCACCGGAGGTTCTTTCTAGGCGAGAGTATGATGTCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGTTGGTTGGAGCATATCCATTTGAGGACCAGGATGTCCCGAGGAATTTCAGAAAAATAATTCAGGTTTGTTTCCTGTGCCTGCAATAA 477 0.3941 MFQGGIENKYKYYLFRINKSAGRFSEDEVRYFFQQLISGVHFWLKILIFFFTLLQICHRDLKLENTLLDGSPAPRLKIYDFGYSKSSLLHSQPKSTVRTPAYIAPEVLSRREYDVKLADVWSCGVTLYVMLVGAYPFEDQDVPRNFRKIIQVCFLCLQ* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1564 158 SMART serkin_6 5 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1564 158 Gene3D Transferase(Phosphotransferase) domain 1 12 154 - -
Amo09g1564 158 SUPERFAMILY Protein kinase-like (PK-like) 14 155 IPR011009 -
Amo09g1564 158 PANTHER SERINE/THREONINE KINASE 15 151 - -
Amo09g1564 158 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 15 151 - -
Amo09g1564 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1564 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Amo09g1564 158 Pfam Protein kinase domain 14 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1564 Amo-Chr9 59321123 59322108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1564 14 156 CBL-interacting serine-threonine protein kinases AT1G30270 42.000 5.03e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo09g1564 Pkinase 1.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1564 K14498 - ahf:112717633 221.09